LOCUS BC040141 1855 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 2, group C, member 1, mRNA
(cDNA clone MGC:48851 IMAGE:5183723), complete cds.
ACCESSION BC040141
VERSION BC040141.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507672.
FEATURES Location/Qualifiers
source 1..1855
/db_xref="H-InvDB:HIT000052331"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48851 IMAGE:5183723"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1855
/gene="NR2C1"
/gene_synonym="TR2-11"
/db_xref="GeneID:7181"
/db_xref="HGNC:HGNC:7971"
/db_xref="MIM:601529"
CDS 209..1612
/gene="NR2C1"
/gene_synonym="TR2-11"
/codon_start=1
/product="nuclear receptor subfamily 2, group C, member 1"
/protein_id="AAH40141.1"
/db_xref="GeneID:7181"
/db_xref="HGNC:HGNC:7971"
/db_xref="MIM:601529"
/translation="MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQF
ILTNHDGSTPSKVILARQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSP
DQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKH
HRNRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLT
ATPTFVTDSESTRSTGLLDSGMFMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVV
TSLANLGKTKDLSQNSNEMSMIESLSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPG
ESTACQSSVAGMEGSVHLITGDSSINYTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHY
IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATI
LATFVNCLHNSLQQAEG"
BASE COUNT 601 a 412 c 377 g 465 t
ORIGIN
1 cgagccgaga aagaggtcac gaactctgac cccccagaaa tacccaaaca cagaaagctc
61 tctccgccgt gaatctcgat cccacatccc gtcggctttc ttcaacctct cttcccggag
121 cgccccccaa tccacgagtg gcagccgcgg gactgtcgcg tcggcgcccg acgccggagt
181 cagcagggcg caaaagcgcc ggtagatcat ggcaaccata gaagaaattg cacatcaaat
241 tattgaacaa cagatgggag agattgttac agagcagcaa actgggcaga aaatccagat
301 tgtgacagca cttgatcata atacccaagg caagcagttc attctgacaa atcacgacgg
361 ctctactcca agcaaagtca ttctggccag gcaagattcc actccgggaa aagttttcct
421 tacaactcca gatgcagcag gtgtcaacca gttatttttt accactcctg atctgtctgc
481 acaacacctg cagctcctaa cagataattc tccagaccaa ggaccaaata aggtttttga
541 tctttgcgta gtatgtggag acaaagcatc aggacgtcat tatggagcag taacttgtga
601 aggctgcaaa ggatttttta aaagaagcat ccgaaaaaat ttagtatatt catgtcgagg
661 atcaaaggat tgtattatta ataagcacca ccgaaaccgc tgtcaatact gcaggttaca
721 gagatgtatt gcgtttggaa tgaagcaaga ctctgtccaa tgtgaaagaa aacccattga
781 agtatcacga gaaaaatctt ccaactgtgc cgcttcaaca gaaaaaatct atatccgaaa
841 ggaccttcgt agcccattaa ctgcaactcc aacttttgta acagatagtg aaagtacaag
901 gtcaacagga ctgttagatt caggaatgtt catgaatatt catccatctg gagtaaaaac
961 tgagtcagct gtgctgatga catcagataa ggctgaatca tgtcagggag atttaagtac
1021 attggccaat gtggttacat cattagcgaa tcttggaaaa actaaagatc tttctcaaaa
1081 tagtaatgaa atgtctatga ttgaaagctt aagcaatgat gatacctctt tgtgtgaatt
1141 tcaagaaatg cagaccaacg gtgatgtttc aagggcattt gacactcttg caaaagcatt
1201 gaatcctgga gagagcacag cctgccagag ctcagtagcg ggcatggaag gaagtgtaca
1261 cctaatcact ggagattcaa gcataaatta caccgaaaaa gaggggccac ttctcagcga
1321 ttcacatgta gctttcaggc tcaccatgcc ttctcctatg cctgagtacc tgaatgtgca
1381 ctacattggg gagtctgcct ccagactgct gttcttatca atgcactggg cactttcgat
1441 tccttctttc caggctctag ggcaagaaaa cagcatatca ctggtgaaag cttactggaa
1501 tgaacttttt actcttggtc ttgcccagtg ctggcaagtg atgaatgtag caactatatt
1561 agcaacattt gtcaattgtc ttcacaatag tcttcaacaa gcagaggggt aatcacctta
1621 aaatgtcatc aaaaatagat ctactagaag gcagcatcac attcccatct tacttatgga
1681 ctcctacccc tggttcatgt cttatatgcc tgtaatggtt ataaagccta ccttcaggaa
1741 agctatggtt gactaattac taatggatgg gttttaaaca tgtccctcta caataaatta
1801 aaatctttat tgtaaaactt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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