LOCUS BC040139 3661 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens branched chain keto acid dehydrogenase E1, beta polypeptide, mRNA (cDNA clone MGC:48849 IMAGE:5493159), complete cds. ACCESSION BC040139 VERSION BC040139.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3661) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3661) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC040139.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: f Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34101271. FEATURES Location/Qualifiers source 1..3661 /db_xref="H-InvDB:HIT000052330" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48849 IMAGE:5493159" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3661 /gene="BCKDHB" /gene_synonym="dJ279A18.1" /gene_synonym="E1B" /db_xref="GeneID:594" /db_xref="HGNC:HGNC:987" /db_xref="MIM:248611" CDS 6..1184 /gene="BCKDHB" /gene_synonym="dJ279A18.1" /gene_synonym="E1B" /codon_start=1 /product="branched chain keto acid dehydrogenase E1, beta polypeptide" /protein_id="AAH40139.1" /db_xref="GeneID:594" /db_xref="HGNC:HGNC:987" /db_xref="MIM:248611" /translation="MAVVAAAAGWLLRLRAAGAEGHWRRLPGAGLARGFLHPAATVED AAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGG VFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQI VNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSP FQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVA WGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLT GGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY " BASE COUNT 1046 a 715 c 742 g 1158 t ORIGIN 1 cggggatggc ggttgtagcg gcggctgccg gctggctact caggctcagg gcggcagggg 61 ctgaggggca ctggcgtcgg cttcctggcg cggggctggc gcggggcttt ttgcaccccg 121 ccgcgactgt cgaggatgcg gcccagaggc ggcaggtggc tcattttact ttccagccag 181 atccggagcc ccgggagtac gggcaaactc agaaaatgaa tcttttccag tctgtaacaa 241 gtgccttgga taactcattg gccaaagatc ctactgcagt aatatttggt gaagatgttg 301 cctttggtgg agtctttaga tgcactgttg gcttgcgaga caaatatgga aaagatagag 361 tttttaatac cccattgtgt gaacaaggaa ttgttggatt tggaatcgga attgcggtca 421 ctggagctac tgccattgcg gaaattcagt ttgcagatta tattttccct gcatttgatc 481 agattgttaa tgaagctgcc aagtatcgct atcgctctgg ggatcttttt aactgtggaa 541 gcctcactat ccggtcccct tggggctgtg ttggtcatgg ggctctctat cattctcaga 601 gtccggaagc attttttgcc cattgcccag gaatcaaggt ggttataccc agaagccctt 661 tccaggccaa aggacttctt ttgtcatgca tagaggataa aaatccttgt atattttttg 721 aacctaaaat actttacagg gcagcagcgg aagaagtccc tatagaacca tacaacatcc 781 cactgtccca ggccgaagtc atacaggaag ggagtgatgt tactctagtt gcctggggca 841 ctcaggttca tgtgatccga gaggtagctt ccatggcaaa agaaaagctt ggagtgtctt 901 gtgaagtcat tgatctgagg actataatac cttgggatgt ggacacaatt tgtaagtctg 961 tgatcaaaac agggcgactg ctaatcagtc acgaggctcc cttgacaggc ggctttgcat 1021 cggaaatcag ctctacagtt caggaggaat gtttcttgaa cctagaggct cctatatcaa 1081 gagtatgtgg ttatgacaca ccatttcctc acatttttga accattctac atcccagaca 1141 aatggaagtg ttatgatgcc cttcgaaaaa tgatcaacta ttgaccatat aggtaggtat 1201 gcatcttgag aaagctacta tgtgcccctg acattaacgt actgttaacc aagacacagc 1261 aatcatcagt gttttgatgg taacaaactt tgatggtaaa gttgataaaa ggcaactttc 1321 agaagaaaat aatgtgcttt agaaaaaaaa ttcaaattta tagtagtata tttacatttt 1381 tgttgttgtt gttctgagat ggagtctcac tctgtcgccc aggctagact gcagtggtgc 1441 aatctcagct cactgcaacc tcccccctac ccccgagttc aagcaattct cctgcctcag 1501 cctgctgagt agttgggatt acaggtgccc accaccatgc ccagctaatt tttgtgtttt 1561 tattggaggt ggggtttcac tatgttggct cagctgattt caaattcctg acctcaagtg 1621 atccacctgc cttagcctcc caaagtgctg ggattacagg catgagccac tgcacctggc 1681 tatatttaca tttaatagaa acatatctag catatgtata tgtgattttt tttttttttg 1741 agaccgagtc tcactctgtc accaggctgg agtgcagtgg tgcgatcttg gctcatggca 1801 acctccgcct cccaggttca agcgattgtc ctgcctcagt ctcctgagta gctgggacta 1861 caggtgtgca ccaacatgcc cagctaattt tttatatttt tagtagagac ggggtttcac 1921 catgttggcc aggatggtct cgatctcttg accttgtgtt ccacccgtct tggcctccca 1981 aagcgctgga attacaggca tgagccaccg cgcctggcct gtatatgtga tttctaaaaa 2041 atagatgcat gcatatgtta acattgaata gtcaatcact agatgaagat gctctctacc 2101 atggtttaga ttgcaagtgt actttatacc attgtttcaa cttcaacctt tatttttgta 2161 tatatttttt caactactta aactgttcat gaataggcgt actttctgta tttaaaaatg 2221 gcccctcaag caccgttaat ttacattcca gttatttaca tgataattca tgacattctg 2281 aaacttgcct gtatattatc tgaaaaatgg atttcttgag gaaaagatct gtttattgta 2341 tgtaaggaaa aattttacct gaaaacaaac aaacaaaccc taaaactcag caccactacc 2401 atttccagaa gcttttttag caagtgaata ttttttacat aatggataat aaatggtatt 2461 tattcatcat gattttctaa gtaatgctta tcagcccctt cagtggtgtt attctaacaa 2521 aatgaataca ttacaaatta ttaagttagc ttttcagagt tttaatatag aagttactag 2581 cactgacaca ctgattttga aatgtttcaa aatgagtaga tacgattaga tcctttacct 2641 tttaatatct agtttttcca aaaatgatag taatatcttt tgaagaacta tgctttttca 2701 aaagcaaaat caactctgta taatagcaca ttctctactt tttaaagatc agaaatgcta 2761 gaattcttga cttttgtgta tgggtagtaa atctagctca ctgaaaatca gagtgaaacg 2821 cctttacatt tgtgcggata gagaagttaa ctctccctca tatgtcactg tgctaccata 2881 atccctacat tttctgtctg ttctagtcta agaatattgt tatagatgga agttaggacc 2941 attagcccac agatgcgtgt attctctcag acataccggt gtagatgcca tatttctgat 3001 gtcttcttaa tgtctgtgaa agcaactggc atctacaata aatcacactt agaactggtt 3061 agaggactcc ctcacttttg ttgtccatgt ggttcccttc cgtggaccag ccgtaataaa 3121 gagccaaggt agtgatggtg gccacgtgcc tcgttgctat ttttaaagta atattcagat 3181 gtggttttaa atttagatta tgtattcctt ttgaaacata agaaaaacat ttaaacctat 3241 gctgaaaata cgataaaaga aaaacaactc caatatgcta aaagttaaat atggtattta 3301 agaaaatagt catgtatgca attgagaaag tctataattt attttacaga aaagctggaa 3361 gattatgact agatatggaa atattttttc tgaatttttt tttatatttc ctccgactta 3421 cctctttttg aaaagagagt ttttattaaa tgaaccatca tgatattggc tgaaaagttc 3481 tacattctat tattgtattg taacacacat gtattgatga ttttcattaa gagtttcaga 3541 ttaactttga aaaatattcc acatggtaat cttataaatt ctgtttaatt acatctgtaa 3601 atattatgtg tgtgatagta ttcaataaag taaaatcaaa ttgtcaaaaa aaaaaaaaaa 3661 a //