LOCUS BC040137 4619 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens SEC24 family, member B (S. cerevisiae), mRNA (cDNA
clone MGC:48822 IMAGE:5492331), complete cds.
ACCESSION BC040137
VERSION BC040137.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4619)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4619)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: f Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454045.
FEATURES Location/Qualifiers
source 1..4619
/db_xref="H-InvDB:HIT000096016"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48822 IMAGE:5492331"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4619
/gene="SEC24B"
/gene_synonym="SEC24"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
CDS 14..3820
/gene="SEC24B"
/gene_synonym="SEC24"
/codon_start=1
/product="SEC24 family, member B (S. cerevisiae)"
/protein_id="AAH40137.1"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
/translation="MSAPAGSSHPAASARIPPKFGGAAVSGAAAPAGPGAGPAPHQQN
GPAQNQMQVPSGYGLHHQNYIAPSGHYSQGPGKMTSLPLDTQCGDYYSALYTVPTQNV
TPNTVNQQPGAQQLYSRGPPAPHIVGSTLGSFQGAASSASHLHTSASQPYSSFVNHYN
SPAMYSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQMFTSQNAPT
VRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDNLIR
NHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVLSGSSGSSSTRTPPTAN
HPVEPVTSVTQPSELLQQKGVQYGEYVNNQASSAPTPLSSTSDDEEEEEEDEEAGVDS
SSTTSSASPMPNSYDALEGGSYPDMLSSSASSPAPDPAPEPDPASAPAPASAPAPVVP
QPSKMAKPFGYGYPTLQPGYQNATAPLISGVQPSNPVYSGFQQYPQQYPGVNQLSSSI
GGLSLQSSPQPESLRPVNLTQERNILPMTPVWAPVPNLNADLKKLNCSPDSFRCTLTN
IPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFVSFIDQRRW
KCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLF
VLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQ
MLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAF
KLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCS
GQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYL
TRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTD
TSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRS
VSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLKQKAFR
TGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQ
KLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDT
LSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLIEDRTEAAFSYYEFLLHV
QQQICK"
BASE COUNT 1342 a 1054 c 897 g 1326 t
ORIGIN
1 caccagcgcc gtcatgtcgg cccccgccgg gtcctctcac ccggccgcca gcgcccggat
61 cccgcccaag ttcggcggag cggccgtctc aggagccgca gcgcccgcgg gcccgggtgc
121 gggcccggcg ccgcaccagc agaacggtcc agcccagaat caaatgcagg ttccatctgg
181 atatggattg catcatcaaa actatattgc tccctcagga cattactctc aaggacctgg
241 gaaaatgacc tcattgccat tggataccca gtgtggtgat tactactctg ctctctatac
301 agtaccaaca caaaatgtga ctcctaacac agtgaaccag caaccaggag cacagcagtt
361 gtacagcagg ggtcctcctg cccctcatat tgtgggatcc actctaggat ctttccaagg
421 tgctgcatcg tcagcatccc atttgcatac gagtgcctcc caaccatact cctcttttgt
481 gaatcactac aatagtccag ccatgtactc tgccagctct tctgttgcgt ctcagggatt
541 tccctctact tgtggtcatt atgctatgtc aactgtttct aatgccgcgt atcctagtgt
601 ttcatatccc tctctgcctg ctggtgatac atatgggcaa atgtttacct cacagaatgc
661 tccgactgtt aggccagtta aagataattc attctctggt caaaatacag ctatcagcca
721 tccatcgcca cttccacctc taccatcaca acagcaccac cagcagcaaa gtctttcagg
781 atacagtact ctaacgtggt catctccagg ccttccatcg actcaagaca atctcatccg
841 aaaccacaca ggatccctgg ctgtagcgaa caacaaccca accattactg ttgcagattc
901 tttatcctgt cctgttatgc aaaatgttca gcctcccaag tccagcccag tggtatccac
961 tgttttatca ggatcctcag gatcctcatc aacaagaaca cctcccactg caaatcaccc
1021 agttgagcct gtgacctcag ttacacagcc atcagagcta ttacaacaaa aaggcgtgca
1081 gtatggtgaa tatgttaata accaagctag ctccgcacca actcccttgt catcaacttc
1141 cgatgatgag gaagaggagg aggaggatga ggaagcaggt gttgacagct cttctaccac
1201 aagcagtgct tctccaatgc ccaacagtta tgatgccctg gaaggaggca gttacccaga
1261 tatgctttct tcatcagcaa gcagtcctgc tcctgatccc gcccctgaac ctgatcctgc
1321 ttctgctcca gctccagctt cagctccagc tcctgtcgtc cctcagcctt caaaaatggc
1381 taagcctttt ggctatggct atccaacact tcagcctggt tatcagaatg ctacagcacc
1441 acttatttct ggagtacagc ccagtaaccc ggtatattct ggattccagc agtatcctca
1501 acagtatcct ggtgtgaacc agctatcctc cagtatagga ggattgagtc ttcagagttc
1561 tccacaacca gaaagcctga gacctgtaaa ccttactcag gagaggaata ttttacctat
1621 gactcctgtt tgggctcctg tacctaactt gaatgcagac ctcaaaaaat taaactgtag
1681 cccagattca tttcggtgta ctttgacaaa tattccacag acacaggctt tactgaataa
1741 agctaagctt cctttaggat tgttgttaca tcccttcaga gacctaacgc aattaccagt
1801 gataacatca aataccattg tgaggtgccg atcctgtcga acgtatatta acccctttgt
1861 atccttcatt gatcaacgta gatggaaatg caatttgtgc tatagagtaa acgatgttcc
1921 tgaagaattt atgtataacc cccttacccg atcttatgga gagcctcata aacgaccaga
1981 agttcagaat tcaactgtgg agttcattgc ttcttcagat tacatgctgc gtcctcctca
2041 acctgcagtt tacttgtttg ttttagatgt gtctcataat gcagtggaag ctggatattt
2101 gacaattttg tgccagtcac tcctagaaaa tctagacaag cttcctggag attcacgaac
2161 aagaatagga ttcatgacct ttgatagcac tattcatttc tacaatttac aagaaggatt
2221 atcacagcct caaatgttga ttgtgtctga tatagatgat gtttttctac ctacaccgga
2281 tagtttactt gtgaatctat atgaaagtaa agagcttata aaagacttac tgaatgcatt
2341 accaaacatg ttcaccaata caagagaaac acacagtgcc cttggtcctg cacttcaggc
2401 tgcctttaaa ttaatgtctc caacaggtgg ccgtgtgtct gtatttcaga cacagttacc
2461 ttccttgggt gcaggacttc tgcaatccag agaagatcct aatcagagat caagtacaaa
2521 ggtggtacaa catcttggcc ctgcaactga tttttataag aaacttgcat tagattgctc
2581 gggacagcaa actgcagtgg atttgttcct tttaagttca cagtattctg atcttgcttc
2641 tctagcttgc atgtccaagt attctgcagg gtgcatctat tattatccat cattccacta
2701 tactcacaat ccttcacaag cagaaaagtt acaaaaagac ctaaaacggt atctcacaag
2761 aaaaattggg tttgaagctg ttatgagaat aaggtgtact aaaggtcttt caatgcacac
2821 ttttcacggt aacttctttg tccgttctac tgatttgtta tcccttgcca acatcaatcc
2881 tgatgctgga tttgcggtgc agttgtcaat tgaagaaagt ttaacagata cttccttagt
2941 atgttttcaa acagccctat tatatacatc aagcaaaggt gagcggagaa ttagagtaca
3001 tacactttgt ttgccagtgg taagttcact agcagatgta tatgcgggag tggatgtaca
3061 agctgccatc tgccttctgg caaacatggc tgtggatcgg tccgtttcat caagtctgtc
3121 agatgcaaga gatgccttag tgaatgctgt agtggactca ttgtctgcat atggctcaac
3181 tgtctcaaat ttacagcact ctgcattgat ggcgcccagc tccctcaagt tgtttcctct
3241 ctatgttttg gcccttctca aacagaaagc atttagaacg ggtacaagca cacggctgga
3301 tgatcgtgta tatgccatgt gtcagataaa gtctcagcca cttgttcatc taatgaaaat
3361 gattcatccc aacttataca ggatagacag attgacagat gagggtgcag tacatgttaa
3421 tgacaggatt gtaccacagc cacctcttca aaaattgtct gcagagaagc tgacaagaga
3481 aggtgctttc cttatggact gtggctctgt tttttacatt tgggttggga aaggctgtga
3541 caataacttc atagaggatg tgcttggata tactaatttt gcatcaatac cacagaaaat
3601 gacacatctt ccagagctag atacactttc atcagaaaga gccagatcct tcataacttg
3661 gcttagagac agcagaccat taagtccaat ccttcacata gtaaaagatg agagtcctgc
3721 caaagcagaa ttttttcagc atttgattga agaccggaca gaggctgcat tttcttacta
3781 tgaatttttg cttcatgttc agcagcagat ttgtaagtga agtagaataa aattgaataa
3841 gaaaaagatc tataacctag gtaaagcata atctgtcaga gaagcgcgtg agaaatttga
3901 aatgaaggca tttgttaata caagatgcaa cgcacagcac tctgtctgag gctttggtaa
3961 aaagtaaagg ggaagaaaga acttgacaga tctttttcaa ctcaaattaa tggtaacgat
4021 gatgctgttt caccaagtat attttgaatt ggtttctaca catttccagt agtatggcag
4081 tacagtgctc tgttcattgc aagctggcaa atttatgtag ctatgtggaa tgatatgtca
4141 taatgtaaaa ttagataaat tcttttttct tataattaat ataacatttc tggacttgaa
4201 ctctggcaag agatgccaaa aggcattggt accgtgttat ttgtttatat gaattacttt
4261 ttaacaagga atgtttctta ttcattaaat gaattcaaca ttttctctgt aaaaacaata
4321 gagtttcagt acatgaacta tagaaaaaaa tctatatata atgtacataa atgttacatt
4381 tgtaaagaaa atgtaaaaat gtaactatag catatgaatt gcttaaactg tgctgcattg
4441 ttggatgaca actctttttg tcacagttag agaatgaggt tgactaatgc atattatgaa
4501 ttgagtccac aaaggaacac aaaactcttt gtaattctgt taaatctttt atgtagattt
4561 atttatgatc agcctactaa ttaaaactat ttcgcttgac aaaaaaaaaa aaaaaaaaa
//