LOCUS BC040118 2533 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone
MGC:48714 IMAGE:5176197), complete cds.
ACCESSION BC040118
VERSION BC040118.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149806.
FEATURES Location/Qualifiers
source 1..2533
/db_xref="H-InvDB:HIT000096002"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48714 IMAGE:5176197"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2533
/gene="CCDC55"
/gene_synonym="DKFZP434K1421"
/gene_synonym="HSPC095"
/db_xref="GeneID:84081"
/db_xref="HGNC:HGNC:25305"
CDS 18..1694
/gene="CCDC55"
/gene_synonym="DKFZP434K1421"
/gene_synonym="HSPC095"
/codon_start=1
/product="coiled-coil domain containing 55"
/protein_id="AAH40118.1"
/db_xref="GeneID:84081"
/db_xref="HGNC:HGNC:25305"
/translation="MAIPGRQYGLILPKKTQQLHPVLQKPSVFGNDSDDDDETSVSES
LQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPK
YIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEE
REKRAAALEACLDVTKQKDLSGFYRHLLNQAVGEEEVPKCSFREARSGIKEEKSRGFS
NEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDEIEETRVNCRREKVIETP
ENDFKHHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTD
RDYRKERDSHRHREASHRDSHWKRHEQEDKPRARDQRERSDRVWKREKDREKYSQREQ
ERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVRKERYENNDKYRDREKREVGVQSSERN
QDRKESSPNSRAKDKFLDQERSNKMRNMAKDKERNQEKPSNSESSLGAKHRLTEEGQE
KGKEQERPPEAVSKFAKRNNEETVMSARDRYLARQMARVNAKTYIEKEDD"
BASE COUNT 1018 a 395 c 603 g 517 t
ORIGIN
1 gcgaacacgg gagcaagatg gcgattccgg gcaggcagta tgggcttatt ttgccaaaga
61 aaacacagca gttgcaccct gttttgcaaa aaccatcagt gtttgggaat gattctgatg
121 atgatgatga gacctctgtg agtgaaagcc ttcagaggga agctgctaag aagcaggcca
181 tgaaacagac caaactggaa atccagaagg cccttgcaga agatgctact gtgtatgaat
241 atgacagtat ttatgatgaa atgcagaaaa aaaaggagga aaataatccc aaattgcttt
301 tggggaaaga cagaaagccc aagtatattc acaacttgct aaaagcagtt gagatcagaa
361 aaaaggaaca ggaaaaaaga atggaaaaga aaatacagag agaacgagaa atggaaaagg
421 gggagtttga tgataaagaa gcatttgtga catctgcata taagaaaaaa ctgcaagaga
481 gagctgaaga agaagaaaga gaaaagaggg ctgctgcact ggaagcatgt ttggatgtaa
541 ccaagcagaa agatctcagt ggattttata ggcacctatt aaatcaagca gttggtgaag
601 aggaagtacc taaatgcagc tttcgtgaag ccagatctgg tataaaggaa gaaaaatcaa
661 ggggcttctc caatgaagta agttcaaaaa acagaatacc acaagagaaa tgcattcttc
721 aaactgatgt gaaagtagag gaaaacccag atgcagacag tgacttcgat gctaagagca
781 gtgcggatga tgaaatagaa gaaactagag tgaactgcag aagggaaaag gtcatagaga
841 cccctgagaa tgacttcaag caccacagga gtcaaaacca ctctcggtca cctagtgaag
901 aaagagggca cagtaccagg caccacacga aaggatcacg aacgtcgaga ggacatgaga
961 aaagggaaga tcagcaccaa cagaagcaat ccagagacca agagaaccat tacactgacc
1021 gtgattaccg gaaagaaagg gattctcata ggcacagaga ggccagtcat agagattccc
1081 attggaagag gcatgaacag gaagataaac caagggcgag ggaccaaaga gaaagaagtg
1141 acagagtatg gaaaagggag aaagataggg agaaatattc ccaaagagaa caagaaagag
1201 atagacaaca aaatgatcag aaccgaccca gtgagaaagg agagaaggaa gagaaaagca
1261 aagcaaagga agagcatatg aaagtaagga aggaaagata tgaaaataat gataaataca
1321 gagatagaga aaaacgagag gtaggtgttc agtcttcaga aagaaatcaa gacagaaagg
1381 aaagcagccc aaattctagg gcaaaggata aatttcttga ccaagaaaga tccaacaaaa
1441 tgagaaacat ggcaaaggac aaagaaagaa accaagagaa accctctaat tctgaatcat
1501 cactgggagc aaaacacaga ctcacagagg aagggcaaga gaagggtaaa gaacaagaga
1561 gaccacctga ggcagtgagc aagtttgcaa agcggaacaa tgaagaaact gtaatgtcag
1621 ctagagacag gtacttggcc aggcagatgg cgcgggttaa tgcaaagacc tatattgaga
1681 aagaagatga ttgatggcta ccccaagaga aagatttaag gaagcacaga aaactgtaat
1741 tcctggaacc tgctgcgtaa aaccataaag gagtgtgtta ccagtagttt ggagggcatt
1801 tttaaattta ttttcaaaat tttaagttaa aagtcagtct tacagcttgg atgtttggat
1861 gtggatgttt ggctgaattt atatatagtg tgtactcatc aataccacat tctttgttgt
1921 attcaagaac cgttaagagt gtgctaattc cctgtaggta cataatgagg aaaatttgct
1981 ccactacaac cattaaaaaa taattttggc cagatacggt agctcgtgcc tgtaatacca
2041 acattttggg aggccaaggc agaaggatat tgaggctagg cattcaagac cagcctaggc
2101 aggataataa gaccttgtct ctatttaaaa aacaaaaagc ctagcatggt agtccatgcc
2161 tgtagtccca gctgttcaag aggctgaggc aagaagatca cttgagccta ggaatttgat
2221 gttacagtga ggtatgatca tgccactgca ctccaacctg ggcaacagaa tgagaccctg
2281 tctctaaaaa atttttttta aataaataat ttaactcttc taataatgtt ttgttgcagg
2341 aaatgtattt cagataaaat atggatttga aaaacagaaa atatacttta tgttctgaaa
2401 tttgtattta agtataaaat gtgaatcatc ttgtctaaat agcttacagc atagttggct
2461 taaatgaaaa taaaatgata tgcttataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaa
//