LOCUS BC040106 900 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens NOP16 nucleolar protein homolog (yeast), mRNA (cDNA clone MGC:48665 IMAGE:6066208), complete cds. ACCESSION BC040106 VERSION BC040106.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 900) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 900) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20127554. FEATURES Location/Qualifiers source 1..900 /db_xref="H-InvDB:HIT000052319" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48665 IMAGE:6066208" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..900 /gene="NOP16" /gene_synonym="HSPC111" /gene_synonym="HSPC185" /db_xref="GeneID:51491" /db_xref="HGNC:HGNC:26934" CDS 49..585 /gene="NOP16" /gene_synonym="HSPC111" /gene_synonym="HSPC185" /codon_start=1 /product="NOP16 nucleolar protein homolog (yeast)" /protein_id="AAH40106.1" /db_xref="GeneID:51491" /db_xref="HGNC:HGNC:26934" /translation="MPKAKGKTRRQKFGYSVNRKRLNRNARRKAAPRIECSHIRHAWD HAKSVRQNLAEMGLAVDPNRAVPLRKRKVKAMEVDIEERPKELVRKPYVLNDLEAEAS LPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYP AEWQDFLDSLQKRKMEVE" BASE COUNT 262 a 202 c 265 g 171 t ORIGIN 1 gagagacaga ggcagcgtgt ttgagctgct ggtgcggtgg tcagcgcgat gcccaaggcc 61 aagggcaaaa cccggaggca gaagtttggt tacagtgtca accgaaagcg tctgaaccgg 121 aatgctcgac ggaaggcagc gccgcggatc gaatgctccc acatccgaca tgcctgggac 181 cacgctaaat cggtacggca gaacctggcc gagatggggt tggctgtgga ccccaacagg 241 gcggtgcccc tccgtaagag aaaggtgaag gccatggagg tggacataga ggagaggcct 301 aaagagcttg tacggaagcc ctatgtgctg aatgacctgg aggcagaagc cagccttcca 361 gaaaagaaag gaaatactct gtctcgggac ctcattgact atgtacgcta catggtagag 421 aaccacgggg aggactataa ggccatggcc cgtgatgaga agaattacta tcaagatacc 481 ccaaaacaga ttcggagtaa gatcaacgtc tataaacgct tttacccagc agagtggcaa 541 gacttcctcg attctttgca gaagaggaag atggaggtgg agtgactggt ttacatcaca 601 gctgccccag gctgaggcgt cccccggacc agtgaagctg gagccagggt gtaaggcaag 661 gaggtgctgt gtggctccag aggagctggc caggtcccat ggaatcagaa ggttacacac 721 acacgtgcac actccccgct ctggggaagg aactgttctc agaggctcca atttatattc 781 atctgggggt tcacggaaaa gccagaacct gctgttttca gggtgggtga tgtaaatata 841 gtgtgtacat aataaagcaa atatatttta cttctctaaa aaaaaaaaaa aaaaaaaaaa //