LOCUS BC040074 2632 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens family with sequence similarity 20, member C, mRNA
(cDNA clone MGC:47858 IMAGE:4942737), complete cds.
ACCESSION BC040074
VERSION BC040074.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2632)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2632)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698727.
FEATURES Location/Qualifiers
source 1..2632
/db_xref="H-InvDB:HIT000052316"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47858 IMAGE:4942737"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2632
/gene="FAM20C"
/gene_synonym="DMP4"
/gene_synonym="RNS"
/db_xref="GeneID:56975"
/db_xref="HGNC:HGNC:22140"
/db_xref="MIM:611061"
CDS 130..1842
/gene="FAM20C"
/gene_synonym="DMP4"
/gene_synonym="RNS"
/codon_start=1
/product="family with sequence similarity 20, member C"
/protein_id="AAH40074.1"
/db_xref="GeneID:56975"
/db_xref="HGNC:HGNC:22140"
/db_xref="MIM:611061"
/translation="MVFLVACALHIALDLLPRLERRGARPSGEPGCSCAQPAAEVAAP
GWAQVRGRPGEPPAASSAAGDAGWPNKHTLRILQDFSSDPSSNLSSHSLEKLPPAAEP
AERALRGRDPGALRPHDPAHRPLLRDPGPRRSESPPGPGGDASLLARLFEHPLYRVAV
PPLTEEDVLFNVNSDTRLSPKAAENPDWPHAGAEGAEFLSPGEAAVDSYPNWLKFHIG
INRYELYSRHNPAIEALLHDLSSQRITSVAMKSGGTQLKLIMTFQNYGQALFKPMKQT
REQETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRDVTRDKK
LWRTFFISPANNICFYGECSYYCSTEHALCGKPDQIEGSLAAFLPDLSLAKRKTWRNP
WRRSYHKRKKAEWEVDPDYCEEVKQTPPYDSSHRILDVMDMTIFDFLMGNMDRHHYET
FEKFGNETFIIHLDNGRGFGKYSHDELSILVPLQQCCRIRKSTYLRLQLLAKEEYKLS
LLMAESLRGDQVAPVLYQPHLEALDRRLRVVLKAVRDCVERNGLHSVVDDDLDTEHRA
ASAR"
BASE COUNT 520 a 839 c 819 g 454 t
ORIGIN
1 gcgaggcggc gccgcgctcg tgcccagctg cagctagagg ggcgcgcggg cagaacgcgc
61 tccaggcccg ggccggcccg cgcggccatg aagatgatgc tggtgcgccg gttccgcgtg
121 ctcatcctga tggtgttcct ggtggcctgc gcgctgcaca tcgccctgga cctgctgccc
181 aggctggagc gacgcggcgc gcggccctcg ggggagcccg gctgttcgtg cgcgcagccc
241 gccgccgagg tggccgcgcc cggctgggcc caggttcggg gccgccccgg ggagcccccg
301 gccgcctcct ccgccgccgg cgacgcgggc tggcccaaca agcacacgct ccgcatcctg
361 caggacttca gctccgaccc ctcctccaac ctctcgtccc actcgctgga gaaactgccg
421 cccgcggccg agccggccga gcgcgccttg cgggggcggg atcccggcgc cctaagaccc
481 cacgaccccg cgcaccggcc gctgctgcga gaccccggcc cgcgtcggtc cgagtcgccc
541 cccggccccg gcggagacgc ctccctcctg gccaggctgt tcgagcaccc gctttaccgg
601 gtggcggttc cgccgctcac ggaggaggac gtcctgttca atgtgaacag cgacaccagg
661 ctcagcccca aagcggcgga gaacccggac tggccgcatg cgggtgctga aggtgcagaa
721 ttcctctccc ccggggaggc ggccgtggac tcctatccca actggctcaa gttccacatt
781 ggtatcaacc ggtacgagct gtactccaga cacaacccgg ccatcgaggc cctgctgcac
841 gacctcagct cccagaggat caccagcgtg gccatgaagt cggggggcac gcagctgaag
901 ctcatcatga ccttccagaa ttacgggcaa gcgctgttca aacccatgaa acaaacgagg
961 gagcaggaga caccccctga ctttttttat ttctctgact acgagaggca caatgcggag
1021 attgctgcct tccacctgga caggatcctg gacttccgcc gggtccctcc cgtggccggc
1081 aggatggtca acatgaccaa ggagatccgg gacgtcacac gggacaagaa gctctggagg
1141 accttcttca tctctccagc caacaacatc tgcttctacg gcgagtgttc ctactactgc
1201 tccacggagc acgccctgtg cgggaagcca gaccagatcg agggctcgct ggcggccttc
1261 ctgcccgacc tgtccctggc caagaggaag acctggcgga acccttggcg gcgttcctac
1321 cacaagcgca agaaggccga gtgggaggtg gaccctgact actgcgagga ggtgaagcag
1381 acaccgccct acgacagcag ccaccgcatc ctggacgtca tggacatgac gatcttcgac
1441 ttcctcatgg gaaacatgga ccgtcaccac tacgagactt ttgagaagtt tgggaatgaa
1501 acgttcatca tccacttaga caatggaaga gggtttggga agtattcgca cgacgagctc
1561 tccatcctgg tgccgctaca gcagtgctgc aggatccgga agtccaccta cctgcgtctg
1621 cagctcctgg ccaaggagga gtacaagctg agcctgctga tggccgagtc tctgcggggg
1681 gaccaggtgg cacccgtgct gtaccagccg cacctggagg ccctggaccg gcggctccgc
1741 gtcgtgctaa aggccgtccg ggactgcgtg gagaggaacg ggctccacag cgtggtggat
1801 gacgacctgg acactgagca cagagccgcc tcggcgaggt agtgtccgcc ggccgctgcg
1861 ctgcccggga cggagacaga ggcgccggac ctcccagcaa gcgcatgcgc ccgtcgtgaa
1921 ttcagtgaat tcagaggcag gacgggatca tccggagtcg ggagctgctg ccacaggagg
1981 cgaggctccc caggtctcat aggacacatt ttgtcagtgt ttgaccagaa aagcttggga
2041 aggaagcgct gtctgtgctc acggacagag gcggccggcg ccggaggcat tccatccttt
2101 ctgtagggaa aggagccttt atttactatt ttgtatttat atttgatgaa taagtatata
2161 aacagagacg tgtacacaga tgccaatcac ctaccaaacc aaacacgagg accgccctcc
2221 ctggttctgg gggcccctca aggccaagct cacccctcaa gtgctctcac actcgggacc
2281 taattcaagt aaaaaccctt tctccttcct ggggcctcgg ctcctggagg gctggagggt
2341 ctcgtctgag gacgggagga ggctctcgct ggacgtctgg cctgtgcgct ggtggacgga
2401 tgcctacgtg gttttggagg acccgatgac caggcgtcct gcgagtccgc ccgctggcct
2461 gcagcaccca cctcggactt ggctgtggac ggttggtgca agtgcatcct gcagggctgg
2521 ctgtgcgcag ctgtgggctg acctttgcag agttttgtgg aatagtttgc aatgtcataa
2581 aagtgcaata aaggtacagc agatgtgaaa aaaaaaaaaa aaaaaaaaaa aa
//