LOCUS BC040073 2265 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens H19, imprinted maternally expressed transcript
(non-protein coding), mRNA (cDNA clone IMAGE:4993796), with
apparent retained intron.
ACCESSION BC040073
VERSION BC040073.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2265)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2265
/db_xref="H-InvDB:HIT000095992"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4993796"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 459 a 642 c 785 g 379 t
ORIGIN
1 ggggcaacca ggggaagatg gggtgctgga ggagagcttg tgggagccaa ggagcacctt
61 ggacatctgg agtctggcag gagtgatgac gggtggaggg gctagctcga ggcagggctg
121 gtggggcctg aggccagtga ggagtgtgga gtaggcgccc aggcatcgtg cagacagggc
181 gacatcagct ggggacgatg ggcctgagct agggctggaa agaaggggga gccaggcatt
241 catcccggtc acttttggtt acaggacgtg gcagctggtt ggacgagggg agctggtggg
301 cagggtttga tcccagggcc tgggcaacgg aggtgtagct ggcagcagcg ggcaggtgag
361 gaccccatct gccgggcagg tgagtccctt ccctccccag gcctcgcttc cccagccttc
421 tgaaagaagg aggtttaggg gatcgagggc tggcggggag aagcagacac cctcccagca
481 gaggggcagg atgggggcag gagagttagc aaaggtgaca tcttctcggg gggagccgag
541 actgcgcaag gctggggggt tatgggcccg ttccaggcag aaagagcaag agggcaggga
601 gggagcacag gggtggccag cgtagggtcc agcacgtggg gtggtacccc aggcctgggt
661 cagacaggga catggcaggg gacacaggac agaggggtcc ccagctgcca cctcacccac
721 cgcaattcat ttagtagcag gcacaggggc agctccggca cggctttctc aggcctatgc
781 cggagcctcg agggctggag agcgggaaga caggcagtgc tcggggagtt gcagcaggac
841 gtcaccagga gggcgaagcg gccacgggag gggggccccg ggacattgcg cagcaaggag
901 gctgcagggg ctcggcctgc gggcgccggt cccacgaggc actgcggccc agggtctggt
961 gcggagaggg cccacagtgg acttggtgac gctgtatgcc ctcaccgctc agcccctggg
1021 gctggcttgg cagacagtac agcatccagg ggagtcaagg gcatggggcg agaccagact
1081 aggcgaggcg ggcggggcgg agtgaatgag ctctcaggag ggaggatggt gcaggcaggg
1141 gtgaggagcg cagcgggcgg cgagcgggag gcactggcct ccagagcccg tggccaaggc
1201 gggcctcgcg ggcggcgacg gagccgggat cggtgcctca gcgttcgggc tggagacgag
1261 gccaggtctc cagctggggt ggacgtgccc accagctgcc gaaggccaag acgccaggtc
1321 cggtggacgt gacaagcagg acatgacatg gtccggtgtg acggcgagga cagaggaggc
1381 gcgtccggcc ttcctgaaca ccttaggctg gtggggctgc ggcaagaagc gggtctgttt
1441 ctttacttcc tccacggagt cggcacacta tggctgccct ctgggctccc agaacccaca
1501 acatgaaaga aatggtgcta cccagctcaa gcctgggcct ttgaatccgg acacaaaacc
1561 ctctagcttg gaaatgaata tgctgcactt tacaaccact gcactacctg actcaggaat
1621 cggctctgga aggtgaagct agaggaacca gacctcatca gcccaacatc aaagacacca
1681 tcggaacagc agcgcccgca gcacccaccc cgcaccggcg actccatctt catggccacc
1741 ccctgcggcg gacggttgac caccagccac cacatcatcc cagagctgag ctcctccagc
1801 gggatgacgc cgtccccacc acctccctct tcttcttttt catccttctg tctctttgtt
1861 tctgagcttt cctgtctttc cttttttctg agagattcaa agcctccacg actctgtttc
1921 ccccgtccct tctgaattta atttgcacta agtcatttgc actggttgga gttgtggaga
1981 cggccttgag tctcagtacg agtgtgcgtg agtgtgagcc accttggcaa gtgcctgtgc
2041 agggcccggc cgccctccat ctgggccggg tgactgggcg ccggctgtgt gcccgaggcc
2101 tcaccctgcc ctcgcctagt ctggaagctc cgaccgacat cacggagcag ccttcaagca
2161 ttccattacg ccccatctcg ctctgtgccc ctccccacca gggcttcagc aggagccctg
2221 gactcatcat caataaacac tgttacagca aaaaaaaaaa aaaaa
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