LOCUS BC040046 697 bp mRNA linear HUM 02-DEC-2004 DEFINITION Homo sapiens LY6/PLAUR domain containing 1, mRNA (cDNA clone MGC:50792 IMAGE:5727798), complete cds. ACCESSION BC040046 VERSION BC040046.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 697) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 697) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (18-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: f Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..697 /db_xref="H-InvDB:HIT000052308" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:50792 IMAGE:5727798" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..697 /gene="LYPDC1" /gene_synonym="MGC29643" /db_xref="GeneID:116372" CDS 150..488 /gene="LYPDC1" /gene_synonym="MGC29643" /codon_start=1 /product="LYPDC1 protein" /protein_id="AAH40046.1" /db_xref="GeneID:116372" /translation="MYAQALLVVGVLQRQAAAQHLHEHPPKLLRGHRVQERVDDRAEV EKRLREGEEDHVRPEVGPRPVVLGFGRSHDPPNLVGHPAYGQCHNNQPWADTSRRERQ RKEKHSMRTQ" BASE COUNT 206 a 160 c 197 g 134 t ORIGIN 1 ctcaatgact gggacttaga ctggggctcg gcctcgctct gaaaagtgct taagaaaatc 61 ttctcagttc tccttgcaga ggactggcgc cgggacgcga agagcaacgg gcgctgcaca 121 aagcgggcgc tgtcggtggt ggagtgcgca tgtacgcgca ggcgcttctc gtggttggcg 181 tgctgcagcg acaggcggca gcacagcacc tgcacgaaca cccgccgaaa ctgctgcgag 241 gacaccgtgt acaggagcgg gttgatgacc gagctgaggt agaaaaacgt ctccgagaag 301 gggaggagga tcatgtacgc ccggaagtag gacctcgtcc agtcgtgctt gggtttggcc 361 gcagccatga tcctccgaat ctggttgggc atccagcata cggccaatgt cacaacaatc 421 agccctgggc agacacgagc aggagggaga gacagagaaa agaaaaacac agcatgagaa 481 cacagtaaat aaataaaacc ataaaatatt tagcccctct gttctgtgct tactggccag 541 gaaatggtac caatttttca gtgttggact tgacagcttc ttttgccaca agcaagagag 601 aatttaacac tgtttcaaac ccgggggagt tggctgtgtt aaagaaagac cattaaatgc 661 tttagacagt gtaaaaaaaa aaaaaaaaaa aaaaaaa //