LOCUS BC040036 841 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 49, mRNA (cDNA clone
MGC:49942 IMAGE:5406966), complete cds.
ACCESSION BC040036
VERSION BC040036.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52856420.
FEATURES Location/Qualifiers
source 1..841
/db_xref="H-InvDB:HIT000052306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49942 IMAGE:5406966"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..841
/gene="C17orf49"
/gene_synonym="MGC49942"
/db_xref="GeneID:124944"
/db_xref="HGNC:HGNC:28737"
CDS 54..572
/gene="C17orf49"
/gene_synonym="MGC49942"
/codon_start=1
/product="chromosome 17 open reading frame 49"
/protein_id="AAH40036.1"
/db_xref="GeneID:124944"
/db_xref="HGNC:HGNC:28737"
/translation="MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTE
TEIEMLRAAVKRFGDDLNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPK
KVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGE
TPPAKKLNFDQA"
BASE COUNT 192 a 251 c 228 g 170 t
ORIGIN
1 cggctcgcgt gtagcggcgg cggcggcgtc tccgtgagga ggcgcgcggg gccatgacgt
61 cagcgtccac aaaggtcgga gagatcttct cggcggccgg cgccgccttc acgaagctcg
121 gggagctgac gatgcagctg catcccgtgg ccgactcttc tcctgcgggc gcgaagtgga
181 cggagacgga aatagagatg ctgagggctg ctgtgaagcg atttggggac gatcttaatc
241 acatcagctg tgtcatcaag gaacggacag tggcccagat aaaggccact gtgaaacgca
301 aggtatatga agattctggc atcccccttc cagctgagtc acccaagaaa gggcccaaga
361 aggtggcatc tggtgtcttg tcacctcctc cagctgcccc tcctcccagc agctccagtg
421 tccctgaggc cgggggtccc cccataaaga aacagaaggc tgatgtgaca ctcagtgctc
481 tgaacgactc cgatgccaac agtgacgtgg tggatattga agggctagga gaaactcctc
541 cagctaagaa actcaacttc gaccaggcct gaccctggat tctggccttc tcatgacctc
601 tgctgatcct cctctcctct cctgctgagc cttccacctc tgacctctca ctgttcatgc
661 cggacctgtg gatctcctgg gactccgagc aaggcctgca cgagagaggg ctgaaaggct
721 gctggggctg ccacctcgct attcccgcat aagcatctgc ccccaacccc tttgaccttc
781 atctgatgga catttttata cagaaaacaa taaagatttc cctctcaaaa aaaaaaaaaa
841 a
//