LOCUS BC040029 993 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, mRNA (cDNA clone IMAGE:5752305), partial cds. ACCESSION BC040029 VERSION BC040029.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 993) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 993) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255899. FEATURES Location/Qualifiers source 1..993 /db_xref="H-InvDB:HIT000095966" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5752305" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>993 /gene="SMARCA2" /gene_synonym="BAF190" /gene_synonym="hBRM" /gene_synonym="hSNF2a" /gene_synonym="SNF2LA" /gene_synonym="Sth1p" /db_xref="GeneID:6595" /db_xref="MIM:600014" CDS 100..>993 /gene="SMARCA2" /gene_synonym="BAF190" /gene_synonym="hBRM" /gene_synonym="hSNF2a" /gene_synonym="SNF2LA" /gene_synonym="Sth1p" /codon_start=1 /product="SMARCA2 protein" /protein_id="AAH40029.1" /db_xref="GeneID:6595" /db_xref="MIM:600014" /translation="MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMM GPSPGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP HPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGD PQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQ QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQ KLPVPAPGGRPSPAPPAAAQPP" BASE COUNT 231 a 349 c 264 g 149 t ORIGIN 1 tttctgtact ctgggtgact cagagaggga agagattcag ccagcacact cctcgcgagc 61 aagcattact ctactgactg gcagagacag gagaggtaga tgtccacgcc cacagaccct 121 ggtgcgatgc cccacccagg gccttcgccg gggcctgggc cttcccctgg gccaattctt 181 gggcctagtc caggaccagg accatcccca ggttccgtcc acagcatgat ggggccaagt 241 cctggacctc caagtgtctc ccatcctatg ccgacgatgg ggtccacaga cttcccacag 301 gaaggcatgc atcaaatgca taagcccatc gatggtatac atgacaaggg gattgtagaa 361 gacatccatt gtggatccat gaagggcact ggtatgcgac cacctcaccc aggcatgggc 421 cctccccaga gtccaatgga tcaacacagc caaggttata tgtcaccaca cccatctcca 481 ttaggagccc cagagcacgt ctccagccct atgtctggag gaggcccaac tccacctcag 541 atgccaccaa gccagccggg ggccctcatc ccaggtgatc cgcaggccat gagccagccc 601 aacagaggtc cctcaccttt cagtcctgtc cagctgcatc agcttcgagc tcagatttta 661 gcttataaaa tgctggcccg aggccagccc ctccccgaaa cgctgcagct tgcagtccag 721 gggaaaagga cgttgcctgg cttgcagcaa caacagcagc agcaacagca gcagcagcag 781 cagcagcagc agcagcagca gcagcaacag cagccgcagc agcagccgcc gcaaccacag 841 acgcagcaac aacagcagcc ggcccttgtt aactacaaca gaccatctgg cccggggccg 901 gagctgagcg gcccgagcac cccgcagaag ctgccggtgc ccgcgcccgg cggccggccc 961 tcgcccgcgc cccccgcagc cgcgcagccg ccc //