LOCUS BC040022 1057 bp mRNA linear HTC 10-MAY-2004 DEFINITION Homo sapiens calpain 12, mRNA (cDNA clone IMAGE:3854861), with apparent retained intron. ACCESSION BC040022 VERSION BC040022.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1057) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1057) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: a Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1057 /db_xref="H-InvDB:HIT000095961" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3854861" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 287 a 289 c 273 g 208 t ORIGIN 1 agctggggtt ggagcagctg tttcaggagc tggctggaga ggaggaagaa ctcaatgcct 61 ctcagctcca ggccttacta agcattgccc tggagcctgg ccatattcaa caagttcgat 121 gaggacacct ctggaaccat gaactcctac gagctgaggc tggcactgaa tgcagcaggc 181 ttccacctga acaaccagct gacccagacc ctcaccagcc gctaccggga tagccgtctg 241 cgtgtggact tcgagcggtt cgtgtcctgt gtggcccacc tcacctgcat cttctgccac 301 tgcagccagc acctggatgg gggtgagggg gtcatctgcc tgacccacag acagtggatg 361 gaggtggcca ccttctccta ggatctccgg atgggcgcac ctgctgctca gggcagggtt 421 gctgagcaag accacctccc taggccttgc ctggcatggg tgccactctc tctggcatcc 481 acctgtctgg ggctagtctc tggccctcac tgctcacggc cgggtgacca ctctggcctg 541 cgtactcctc actcagaaac aagaacagcg acagcccctc tcgagcagat gacacgagct 601 agtccacgtt gacagcttaa gacagtgcta gctctgccct ggctctccta gaaggtggag 661 gacagacaca ggagaaataa aaaaagatga tgctgcagga atccttctta aaaatattac 721 atgttttatt atcctgtccc cagagggtgg tttatccaga aaccaagaaa aaaaatcaat 781 cagaataaac tcaaaaaaaa aaggtagggg gagcaaaacc atcaaccacc aggcagccag 841 gccatcagcc cacctccacc tctggagggt ccccagagac ccacgcccga cgcagacccg 901 gaggagcatc agcaaggggc ccgggcagag aatcggctat gtcttcatta tgagagcagg 961 agagacggca gagatatgtt gctaggtgaa tatatattta tataataaat ccgtaagtta 1021 ataaagtaaa tagtaattct caaaaaaaaa aaaaaaa //