LOCUS BC040020 3974 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens zinc finger protein 280B, mRNA (cDNA clone MGC:49006
IMAGE:5785297), complete cds.
ACCESSION BC040020
VERSION BC040020.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC040020.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38202248.
FEATURES Location/Qualifiers
source 1..3974
/db_xref="H-InvDB:HIT000052303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49006 IMAGE:5785297"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3974
/gene="ZNF280B"
/gene_synonym="5'OY11.1"
/gene_synonym="D87009.C22.3"
/gene_synonym="ZNF632"
/db_xref="GeneID:140883"
/db_xref="HGNC:HGNC:23022"
CDS 323..1954
/gene="ZNF280B"
/gene_synonym="5'OY11.1"
/gene_synonym="D87009.C22.3"
/gene_synonym="ZNF632"
/codon_start=1
/product="ZNF280B protein"
/protein_id="AAH40020.1"
/db_xref="GeneID:140883"
/db_xref="HGNC:HGNC:23022"
/translation="MEQSCEEEKEPEPQKNIQETKQVDDEDAELIFVGVEHVNEDAEL
IFVGVTSNSKPVVSNILNRVTPGSWSRRKKYDHLRKDTARKLQPKSHETVTSEAVTVL
PASQLESRSTDSPIIIEPLSKPDYRNSSPQVVPNNSSELPSPLITFTDSLHHPVSTAL
SVGGINESPRVSKQLSTFEVNSINPKRAKLRDGIIEGNSSASFPSDTFHTMNTQQSTP
SNNVHTSLSHVQNGAPFPAAFPKDNIHFKPINTNLDRANELAKTDILSLTSQNKTFDP
KKENPIVLLSDFYYGQHKGEGQPEQKTHTTFKCLSCVKVLKNVKFMNHVKHHLEFEKQ
RNDSWENHTTCQHCHRQFPTPFQLQCHIENVHTAQEPSTVCKICELSFETDQVLLQHM
KDHHKPGEMPYVCQVCHYRSSVFADVETHFRTCHENTKNLLCPFCLKIFKTATPYMCH
YRGHWGKSAHQCSKCRLQFLTFKEKMEHKTQCHQMFKKPKQLEGLPPETKVTIQVSLE
PLQPGSVDVASITVSTSDSEPSLPRSKSKISKKSH"
BASE COUNT 1149 a 865 c 779 g 1181 t
ORIGIN
1 gccggctgtg ccccgggagc gcctccgggg ctggtgcgtg gccggcagct cgcgaacagc
61 agctgatccg gactggatgt gaccttctgc ctggaatagc tcaagttctt aaaagttgcg
121 ttgtaataaa cctgaggctg ggaagttcaa gatcaagatg ctggacgatt tggttcctta
181 gtgaaggctc tcttcctggc tggtggatga cagccttctt gctgtgttct cacatgacag
241 aaagaggaag caaggtggca gtttatataa aggaagcatt gggacttgtg gccccaccat
301 tcaggaataa aaaaattaga aaatggaaca atcatgtgag gaagagaaag agcctgaacc
361 acagaagaac atacaagaaa ccaaacaagt agatgacgaa gatgctgagc tcatctttgt
421 tggtgtggaa catgtaaatg aagatgctga gctaatcttt gttggggtga cttcaaattc
481 aaaaccagtc gtttcaaaca ttttgaacag agtcaccccg ggttcatggt caaggagaaa
541 aaagtatgat caccttagaa aagatactgc tcgcaaattg cagcctaaaa gtcatgagac
601 cgttacatca gaagcagtga ccgtcctgcc agcttcccaa cttgaatcga gatcaacaga
661 tagtcctatt attattgagc ctttgtctaa acctgattat agaaatagtt caccacaagt
721 tgtgcctaat aactcttcag aattaccttc tcctttgatt acattcacag attcattgca
781 tcatccagta agtacagcac tttcagtagg aggtataaat gaaagtcctc gtgtatcaaa
841 gcaactttcc actttcgaag taaacagcat aaatcccaaa agggctaaac tcagggatgg
901 aattatagaa ggaaattctt cagcttcatt cccttcagat acctttcata caatgaatac
961 tcagcaaagt acaccctcaa ataatgttca tacctcatta agccatgttc agaatggagc
1021 accttttcca gcagcttttc caaaggacaa tatccatttc aagcctataa atacaaatct
1081 tgatagggca aatgaattgg caaaaacaga cattttgagt ctaacaagtc aaaacaagac
1141 ctttgatccc aagaaagaaa atcccattgt gttacttagt gacttttact atggacagca
1201 taaaggagaa gggcagccgg aacagaagac tcacaccacc tttaaatgcc tcagctgcgt
1261 gaaagttcta aaaaatgtta agtttatgaa tcacgtgaag catcatttgg aatttgagaa
1321 gcagaggaac gacagctggg aaaaccacac cacctgccag cactgccacc ggcagtttcc
1381 cactcccttc cagctacagt gtcacatcga aaatgtccac actgcccagg agccctctac
1441 tgtctgtaaa atctgtgaat tgtcatttga aacagatcag gtcctcttac aacacatgaa
1501 ggaccatcat aagcctggcg aaatgcccta tgtgtgccag gtttgccatt atagatcgtc
1561 ggtctttgct gatgtagaaa cacattttag aacgtgccat gaaaacacaa agaatttgct
1621 ttgtcccttt tgtctcaaaa ttttcaaaac agcaacacca tacatgtgtc attatagggg
1681 ccactgggga aagagtgcac accagtgttc caagtgccgg ctacagtttt taactttcaa
1741 ggagaaaatg gagcacaaga cccagtgtca tcaaatgttt aagaagccta agcaactaga
1801 aggattacct cctgaaacaa aagttactat tcaagtgtcg ctggaacctc ttcagccagg
1861 atcagtggat gtagcatcca taactgtgag cacatctgac tctgaaccat cactccccag
1921 gtctaaaagc aaaatttcaa aaaagtccca ttaattctag tttcagtaaa tctaaagcaa
1981 gtatttcaaa ccaaattaaa aaacctcata aaacaaaaaa tacaaaccat acattattca
2041 gtagcaccaa aaatagtgaa actagtggat tatatatgac tttttaaaca agattcagga
2101 tatatattat ttgatctgaa ttttgaggta ttattttaaa acatctggtt ttcatgttaa
2161 ctgtatctgg cttaacacat aaaaggtgtt tgtgtgtgtg tgtgagagag agaaaaaggt
2221 attaatttat ttttttaatt ttaatttttt tttttttttt ttttttactt tagagacagg
2281 gtctcactgt tacccaggct ggagtgcagt ggcgtgatcc tagctcactg caaccttgaa
2341 cttccaggct caagcattcc tccgcctcag cctttggaga gtagctagga ctacaggcgc
2401 agccaccaca cccagctaat tttttatttt aattttttgt agcgatggaa tcttgttatg
2461 tcgcccaggg tggtctcgaa ctcctgacct taggggagcc tcctgcctca gcctccccaa
2521 gtgctgggtt gtgtgagtca ctgcccctgg cacctattta ttgttttggt atttcatgtt
2581 actcctaagc ttgaaagctc ttttttctat atacagaatt catagaattt ttgaaatact
2641 tagttttctt tacagctttt tccatgcatt cagcatttca tggttaactc tagtcagact
2701 ggaatggctt tgttatgccc tggcccactt gctgccgaat tcccagaagt gcctctgctg
2761 tgctggcata aaataacctg aaaagattct gaaaagccag gatgtggaat tgaaagagaa
2821 gctgctgcgt gagcagagac caagaaggcg gaggggctgt ttcacagtat tctggagtac
2881 cttttgagta ttggttcctg aacatcagca gtcttggctg cctctgtgga ctcccggagt
2941 tgtctccctg cttgtgttct ggtgccatcc tttgttcctc cacccctgac caaggtgccc
3001 agcagcctgt cttcaccagt caaggaatcc gccatcttgg ctgtagacat acataggtct
3061 ggagaaatct ctcccttttt ccttgatttc tttttaaagg taccttatct ctccccactc
3121 ctttcttccc tcctcaatct agttaaattt cctaagcttt cacaaaaatc cgggaagaga
3181 taattaagag cttagcatcc ctcttagagt agaaggcagt acagataaca aagaagaaaa
3241 gagtatatta tctacatttt agaaaatttt ctgactctag atccatagat tctgttgtat
3301 ttatttgccg gacactcatt tgattgattt gcaccttgaa cactatacta ggtcttttca
3361 gttacgttgc ttgggttaag acactttgct aaaattacag cctgaatcct ttctttagtt
3421 gaagaaaggg tatgtgtgtg caagtgggtg tgtgtgtgcc agtttttctt gtctcaggta
3481 gatactccca ctgtgtataa atagatctac agacttttca tacttacctc ccgtattctg
3541 tttctgtggt aaaaatatga agtgttttag ttgtatgttg agtgattggt tggtattatc
3601 aacactgttg tttgcagtct cattaaagca tgctcttaag gagtacatat ggtcattaat
3661 tgccaactgt agattccagt gatctggccc ctgcctacct ccttcctctc tttttcattc
3721 tctgtcatgc ttctccactg ttttccccaa tgatgcacta ttttgacaca ctggccttgc
3781 tattccttaa gcaaatcaca ttcttcccaa tccaaagact ttgcacatgc tgttgtcttt
3841 cttagaatgc ccttccccta ggcctgcatg gcttgctacc tcacttaatt gtttgacact
3901 tcctttggtt cattgagctt caagaatctt aaaatgccac tgacaatgag atctccctta
3961 aaaaaaaaaa aaaa
//