LOCUS BC039906 3553 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 2,
mRNA (cDNA clone MGC:47614 IMAGE:6066481), complete cds.
ACCESSION BC039906
VERSION BC039906.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3553)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3553)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29893561.
FEATURES Location/Qualifiers
source 1..3553
/db_xref="H-InvDB:HIT000052292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47614 IMAGE:6066481"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3553
/gene="PDSS2"
/gene_synonym="bA59I9.3"
/gene_synonym="hDLP1"
/db_xref="GeneID:57107"
/db_xref="HGNC:HGNC:23041"
CDS 277..1476
/gene="PDSS2"
/gene_synonym="bA59I9.3"
/gene_synonym="hDLP1"
/codon_start=1
/product="prenyl (decaprenyl) diphosphate synthase,
subunit 2"
/protein_id="AAH39906.1"
/db_xref="GeneID:57107"
/db_xref="HGNC:HGNC:23041"
/translation="MNFRQLLLHLPRYLGASGSPRRLWWSPSLDTISSVGSWRGRSSK
SPAHWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLV
HDSWNSLQLRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALL
VHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASA
LMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEV
QNMAFQYGKHMAMSHKINSDVQPFIKEKTSDSMTFNLNSAPVVLHQEFLGRDLWIKQI
REAQEKGRLDYAKLRERIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV
FAVTRFS"
BASE COUNT 979 a 724 c 805 g 1045 t
ORIGIN
1 ccacgcgtcc ggcgtcctcc acataggcag tggctgtggt ttctaccccg ggtggccggg
61 ggcagtgctg agctgggact gttgtttgcc cagcctgggc tgcagaaagc agcagttaaa
121 gttcgtttct ggtcactgct ccaggaagcc accttactct gagggtcaag aattgccgct
181 tccttttagt tactgtaagt tcctcctctg cccctggttt gtttcccgcg gcacttctgg
241 atacccccag gtcccagacc cttccagact caaaccatga actttcggca gctgctgttg
301 cacttgccac gttatcttgg agcctcgggt tccccgcgtc gcctgtggtg gtccccgtcc
361 ctcgacacca tctcctcggt gggctcttgg cgtggtcggt cctccaagtc cccggcccac
421 tggaatcagg tagtgtcaga ggcggagaag atcgtggggt accccacgtc cttcatgagc
481 cttcgctgcc tgctgagcga cgagctcagc aacatcgcta tgcaggtgcg gaagctggtg
541 ggcactcagc accctctgct taccacagcc agggggcttg tacatgacag ctggaatagc
601 ctccagttga ggggcttggt ggtgctcctt atctctaaag cagctgggcc cagcagcgtg
661 aacacttcat gtcagaacta tgacatggtc agtgggatct actcatgtca aagaagtttg
721 gcagagatca cggagctaat tcatattgct ctccttgtac atcgtgggat agtaaattta
781 aatgagttgc aatcatctga tggtccactg aaagacatgc aatttggaaa taaaattgct
841 atcctgagtg gagactttct tctagcaaat gcctgcaatg gactagctct gctacagaac
901 accaaggttg tggaactttt agcaagtgct cttatggact tggtacaagg agtatatcat
961 gaaaattcta cttcaaagga aagttatatc acagatgata ttggaatatc gacttggaag
1021 gagcagactt ttctctccca tggtgcctta ctagcaaaga gctgccaagc tgcaatggaa
1081 ttagcaaagc atgatgctga ggttcagaat atggcatttc agtatgggaa gcacatggcc
1141 atgagtcata agataaattc tgatgtccag ccttttatta aagaaaagac cagtgactcc
1201 atgactttta atctaaactc agctcctgta gtcttacatc aggaatttct tggaagagat
1261 ttgtggatta aacagatcag agaggctcaa gaaaaaggaa gattggacta tgctaagttg
1321 cgagaaagaa tcaaagctgg caaaggtgtg acttcagcta ttgacctgtg tcgttaccat
1381 ggaaacaagg cactggaggc cctggagagc tttcctccct cggaggccag atctgcttta
1441 gaaaacattg tgtttgctgt gaccagattt tcatgacatc aaattaaaaa gacactattg
1501 ttagttagct gaaaatccta gggaatgagg ttgattggga gcgctttcac gatgcgttaa
1561 tgacttttaa aacatatgca tttttccttc cttttatcac attgctaaat gagttctgct
1621 ttctttttgg aactgctaca aacaaaatta gaagaaaaaa aggtcaagca gttttcactt
1681 gtcacgccag aagcacactt gaggctgcag tcgcagaaat aattaatgag attcgctcct
1741 gtgacctcag caaatggaca ggaaataagt ccttattgat tggaccgagc cagggatggc
1801 gccagggcgg tggcctgtgg tttttcctgc tagagaggac aaagcaagtt ggaagctgca
1861 ggtgtcaaga gaaatgctct caataccaac cagggaggat tgtctaatca aaaactagtg
1921 accaatttgt cataatggag agtagttcaa tggattgaga aaaatatgtt ttatttgttg
1981 gcttgtaatt atgtctctgg attattatta tttttttttt agatgtagtt ttgctcttgt
2041 tgcccaggct ggagtgcaat ggtgcagttt tgactcactg caacctccgc ctcctgggtt
2101 caagtgattc tcctgcctca gcctcccgag tagctggaat tacaggcacc tgccaccacg
2161 cctggctaat tttgtatttt tagtagagat ggggtttcac tatgttggtc aggctagtct
2221 cgaactcctg acctcaggtg atccgcctgc ctcggcctcc caaagtgctg ggattagagg
2281 cttgagccac tgcacctggc ctcatgtctc tggatttata atgcagtatg aatatacttt
2341 gtgctttatg gtttttataa tgtctttttg gagaaattgc cgaaaagttg ccaaatactt
2401 gaagtaggag attaaaatgt tatcaaatgt taaattggtt atattaggaa tagtctgttt
2461 ttctttcctg aagatcagtt tttttattca aacacatttc aaagaaccaa attttttttt
2521 ttctttaagg aaaaaggagc tttttttcaa gtgaaatgta ttcatttgta atactttggt
2581 ttaaggcata ctttaatttt tacgagtttc agaaacagaa tttttgtact agggaattca
2641 ttggtgagag tgttctttta acctcagaat gtcaaatttt ggtcttgaac cacagacatc
2701 caattacaga aagaatataa gcaatctcac aggcctgcaa tcggacactg tctctgtgtg
2761 gttcatagga gatgattttt gaggtttgca ctcatgcaat ttgagaacac cgttgacaag
2821 aaggctgagt ttacataaat gatctagatt gaaactcagc tacctttctt cctcatgtgg
2881 tgtaattaca gccctatctg gagacagcga atacagcaaa cagattttat tacctagttc
2941 gctcaaacac tacatgaagt tattttagtt aaagccctcc cccaaaagtt ataaaaccat
3001 tttatcaggg cccaacatgt ggcatgcaat gaagagaaaa tgtaaagcta cagaggttaa
3061 tgtattgtat tataaaatat tttaagtgta ctcaaaatat cataattgta cagtttatgc
3121 caccataatt tgaggcctat agatttagct taagagaaca ctgttctgtt tgaaatgctt
3181 tctgtcactg aaattggctt aattagtaac catggataag atgctttaga tcagactagg
3241 ttttaatcat taacttccac aaagaagtca tactttgcgt taggtgtgct ggttggatgt
3301 gcaggaactt cagcaagcag taggttttac taagcagatg gtcgggcact gcagggcacc
3361 aggcaggatc ctagggcgcc tcttattctg cgttagcatc tggtttgctg tatgaccttg
3421 cacaagtcac ttccttctga gcctcaattt tctcatctgt acaatgagat tcaaaagttg
3481 acctgaaagt caagtgtgaa aaaaaaaaaa gagattaaac aagataatta tgaaattcaa
3541 aaaaaaaaaa aaa
//