LOCUS BC039900 2470 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens SUMO1/sentrin specific peptidase 7, mRNA (cDNA clone
IMAGE:5185280), with apparent retained intron.
ACCESSION BC039900
VERSION BC039900.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2470)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2470)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: d Column: 15
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2470
/db_xref="H-InvDB:HIT000095946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5185280"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 871 a 354 c 409 g 836 t
ORIGIN
1 gcttgacaag aaaggaaaat aatttaacag aagataatcc aaatctttca atggcacaga
61 gaagacataa aagagtaaga acatggactc gtcacataaa catttttaat aaagattaca
121 tctttgtacc tgtaaatgag tcgtctcact ggtatctcgc agtcatttgt tttccatggt
181 tagaagaagc tgtgtatgaa gattttccac aaactgtatc ccagcagtcc caggctcagc
241 agtcccaaaa tgacaacaaa acaatagata atgatctacg tactacttcg acactgtctt
301 tgagtgcaga ggattcccaa agtaccgagt cgaatatgtc agtaccaaag aaaatgtgta
361 aaaggccatg tattcttata ctagactcct tgaaagctgc ttctgtacaa aacacagttc
421 agaatttacg agagtattta gaggtagagt gggaagttaa actaaaaact catcgtcaat
481 tcagcaaaac aaacatggtg gatctatgcc ctaaagttcc taaacaggac aatagcagtg
541 attgtggagt atatttattg cagtatgtgg aaagcttctt caaggatcct attgttaact
601 ttgaacttcc aattcatttg gagaagtggt ttcctcgtca tgtaataaag accaaacggg
661 aagatattcg agagctcatc ttgaaacttc atttacagca acagaagggc agcagtagct
721 agttaatctg tacaaacatg acacagatgt tctctaagat tactggaaag cctcttacca
781 gcatttgtgt tagccagctc acagagaaga aaataacttg cagtagtttt ataataagtc
841 attggaacat tatttaaaat atgtaggaca cattattaga attgttggga tctcatagat
901 ggaatgggaa tgggggtgat atagataaac ttactagata taaattaaaa ttttataaat
961 atttcatatt tttctgagta aatatgattg gattatgcaa cagcatatgt aatatgggaa
1021 tgttttgtag ataataaaac ttacatgatc tgtacttcca cgtgactggg tgctgagggg
1081 agttaaagcc tccctggtgc cagccccagt gcttgtcaaa tttgctgaca ggtcacatca
1141 tattgtaatt ctattctttg cagctcaagc atgcagtatg aatactgtgt attttttaaa
1201 aaaataattt agtatcaagg cttcagaaaa tgccatttac ggcatccctt ctgtatgtaa
1261 caaaaagaca ttcataatgt taggaagatg ataaaaattc gctcttttaa agtgcagctt
1321 attattctca attgctaaat acgattactc tgcttttttt tttttcattt cttttgatgt
1381 catatgtgag tatcttataa tttagttcat ttgttcaggg taaaatttga aacaaaaaat
1441 tttacctgtg caaaatagtt ttttaaaaat tatacatgta gctcaacttg aggtactgct
1501 atataaatat tcactcacat tatcacggaa tttatgtata gtttctctaa tatagaagat
1561 aaaattggtg tcctcataac tttaacaaag aaaaccctca gtcctattta ttaatgggta
1621 gaattaaata tataatttta tagctcagtt tacccagtat tcatctgcaa agccagattg
1681 ctctcattgc ttttatattt ttaaattgta gcttttagag acctatgatc ctcatggaac
1741 ttaatttttt attaaatatt caggtaacag ttctgaattc atgtgataat ggtggcatta
1801 tatatgatta aacacttcag aactttctaa tgttatcagg agtattttga gggagatatg
1861 attatattgt attttctcag ataagaaaaa tgttttttaa caatattatt ttaatctgtt
1921 ttaagcatct cttagattta cattgtaact acataaagca gtgaagcaaa ggcaaattaa
1981 gataaagcta gaaagtctga acattttatt tcaaaatcat acgaatcggg gtcagttaag
2041 cctcagtatt cttagctttt gttgattttg gcactatctt tatattatta aatatatttg
2101 ttgtttggat atttcatata aagatggcta taattacata tttcattccc aatttgtgtg
2161 tgttgggggg tacttttaaa ggtgactatt gttttgtaca tctaattttg ggaaagcaag
2221 tctataagac atcttgtgat ttcttaatgt ttttgtttgt atgtttttca aagatatcac
2281 tgtcctttat catgttttga agattgttta aaattcattt tcctaaatta atgtgcaagt
2341 aatgttttga ggatatcagt gttttatatt aaacatattt ccaattcatt aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa
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