LOCUS BC039895 3089 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens breast cancer anti-estrogen resistance 3, mRNA (cDNA
clone MGC:47777 IMAGE:6060541), complete cds.
ACCESSION BC039895
VERSION BC039895.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3089)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3089)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62243893.
FEATURES Location/Qualifiers
source 1..3089
/db_xref="H-InvDB:HIT000052286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47777 IMAGE:6060541"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3089
/gene="BCAR3"
/gene_synonym="NSP2"
/gene_synonym="SH2D3B"
/db_xref="GeneID:8412"
/db_xref="HGNC:HGNC:973"
/db_xref="MIM:604704"
CDS 146..2623
/gene="BCAR3"
/gene_synonym="NSP2"
/gene_synonym="SH2D3B"
/codon_start=1
/product="breast cancer anti-estrogen resistance 3"
/protein_id="AAH39895.1"
/db_xref="GeneID:8412"
/db_xref="HGNC:HGNC:973"
/db_xref="MIM:604704"
/translation="MAAGKFASLPRNMPVNHQFPLASSMDLLSSRSPLAEHRPDAYQD
VSIHGTLPRKKKGPPPIRSCDDFSHMGTLPHSKSPRQNSPVTQDGIQESPWQDRHGET
FTFRDPHLLDPTVEYVKFSKERHIMDRTPEKLKKELEEELLLSSEDLRSHAWYHGRIP
RQVSENLVQRDGDFLVRDSLSSPGNFVLTCQWKNLAQHFKINRTVLRLSEAYSRVQYQ
FEMESFDSIPGLVRCYVGNRRPISQQSGAIIFQPINRTVPLRCLEEHYGTSPGQAREG
SLTKGRPDVAKRLSLTMGGVQAREQNLPRGNLLRNKEKSGSQPACLDHMQDRRALSLK
AHQSESYLPIGCKLPPQSSGVDTSPCPNSPVFRTGSEPALSPAVVRRVSSDARAGEAL
RGSDSQLCPKPPPKPCKVPFLKVPSSPSAWLNSEANYCELNPAFATGCGRGAKLPSCA
QGSHTELLTAKQNEAPGPRNSGVNYLILDDDDRERPWEPAAAQMEKGQWDKGEFVTPL
LETVSSFRPNEFESKFLPPENKPLETAMLKRAKELFTNNDPKVIAQHVLSMDCRVARI
LGVSEEMRRNMGVSSGLELITLPHGHQLRLDIIERHNTMAIGIAVDILGCTGTLEDRA
ATLSKIIQVAVELKDSMGDLYSFSALMKALEMPQITRLEKTWTALRHQYTQTAILYEK
QLKPFSKLLHEGRESTCVPPNNVSVPLLMPLVTLMERQAVTFEGTDMWEKNDQSCEIM
LNHLATARFMAEAADSYRMNAERILAGFQPDEEMNEICKTEFQMRLLWGSKGAQVNQT
ERYEKFNQILTALSRKLEPPPVKQAEL"
BASE COUNT 821 a 835 c 798 g 635 t
ORIGIN
1 ccacgcgtcc ggcgtcccca gctccgggag cagccgcggc gcgggcggtg cgaggccggc
61 cgcgcggcgc ctttgagccc cagccggagg tccagagatc ctgagagccc gagcgcccag
121 cgccgcgccg ggagagttga gaattatggc tgcaggaaaa tttgcaagcc ttcccagaaa
181 catgccggtg aatcaccagt tccccctggc ctcatccatg gaccttctga gcagcaggtc
241 ccctctcgct gagcatcgcc cagatgccta tcaagatgtg tctatacatg gcacccttcc
301 acggaagaaa aaaggtcctc ctcccataag gtcctgtgat gacttcagtc acatgggcac
361 cctcccccac tccaaatccc cacggcagaa ctcgcctgtg acccaggatg gcatccagga
421 gagcccatgg caggaccggc acggcgaaac cttcaccttc agggatccac atcttctgga
481 cccaactgtg gaatatgtga agttctccaa ggagaggcac atcatggaca ggacccccga
541 gaaactgaag aaggagctgg aggaggagct gctcctgagc agcgaggacc tgcgcagcca
601 tgcctggtac cacggccgca tcccccgaca ggtgtctgaa aaccttgtgc agcgagatgg
661 tgacttccta gttcgtgact ctctgtccag ccctgggaac tttgtcctga cctgtcagtg
721 gaagaacctc gctcagcact tcaaaatcaa ccggacagtt ctgcgactca gcgaggccta
781 cagccgcgtg cagtaccagt tcgagatgga gagcttcgac tccatccccg gcctggtgcg
841 ctgctacgtg ggcaaccgcc ggcccatctc ccagcagagt ggcgccatca tcttccagcc
901 catcaacagg acggtgcctc tgcggtgcct ggaggagcat tatggcacct ccccaggcca
961 ggcccgggag ggcagcctca ccaagggaag gccggatgtg gccaagaggc tgagcctcac
1021 catgggtggc gtccaggccc gagagcagaa tttgcccagg ggaaacctcc tcagaaacaa
1081 agaaaagagt ggtagccagc ccgcctgcct ggatcacatg caggacagaa gagccttgtc
1141 cctcaaagcc caccagtcag agagctacct gccgattggc tgcaagctgc cacctcagtc
1201 ctcgggtgtg gacacaagcc cctgcccaaa ctcacctgtg ttcaggacgg gaagcgagcc
1261 tgccctgagc ccagcagtgg ttcggagggt ctcctcagac gccagggctg gggaggcgct
1321 gaggggatca gacagtcaac tgtgccctaa gcccccgcct aagccctgca aggtgccgtt
1381 cctcaaggtt ccctcgtctc cctctgcctg gctcaactca gaggccaact actgtgaact
1441 gaacccagcg tttgccacag gctgcggcag gggagcaaag ctaccctcat gtgcccaggg
1501 aagccacaca gaactgctca cagccaagca gaatgaggcg ccaggtcccc ggaactctgg
1561 cgtcaactac ttgatccttg atgatgatga cagggaaaga ccttgggaac ctgcggcagc
1621 tcagatggag aaggggcagt gggacaaggg cgagtttgtg acgcccctcc tggagactgt
1681 ctcctccttc aggcccaacg agtttgagtc aaagttcctt ccccctgaga ataagcccct
1741 ggaaacagca atgttgaaac gtgcaaaaga actgttcacc aacaacgacc ccaaggtcat
1801 cgcccagcac gtactgagca tggactgcag ggttgctagg atacttggag tctctgaaga
1861 gatgaggagg aacatggggg tgagctcagg cctggaactc attaccttgc ctcacggaca
1921 ccagctgcgc ctggacataa ttgaaagaca caacacaatg gccatcggca ttgcagtgga
1981 cattctggga tgcacgggca ctttggagga ccgagcggcc actctgagta agatcatcca
2041 ggtggcggtg gaactgaagg attccatggg ggacctctat tccttctcag ctctcatgaa
2101 agccctggaa atgccacaga tcacaaggtt agaaaagacg tggactgctc tgcggcacca
2161 gtacacccaa actgccattc tctatgagaa acagctgaag cccttcagca aactcctgca
2221 tgaaggcaga gagtccacat gtgttccccc aaacaatgta tcagtcccac tgctgatgcc
2281 gcttgtgacg ttaatggagc gccaggctgt gacttttgaa ggaaccgaca tgtgggaaaa
2341 aaacgaccag agctgtgaaa tcatgctgaa ccatttggca acagcgcgat tcatggccga
2401 ggctgcagac agctaccgga tgaatgctga gaggatcctg gcaggttttc aaccagatga
2461 agaaatgaat gaaatctgca agactgaatt tcaaatgcga ttgctatggg gcagcaaagg
2521 tgcacaagtc aatcagacag agagatatga gaaattcaac cagattttaa ctgccctctc
2581 gcgtaaattg gaacctcctc ctgtaaagca ggcagagctt tgataactct ccagagaacc
2641 tttagaatat cttttcaagt ttccccagct tcatctttgg gaaagcttac tgtttttgat
2701 aaagtaataa tgtgcaaatc tgacaatata caagctttta gtatccacag gatattaaac
2761 gtgtaaattg cacagagcac acttatttat gaattgtcta aagttactac tgattttaaa
2821 atgaataatt tattattaag gtaactactg ctaatgttga tcagcaaatt taagagaaga
2881 cctagctatg ttggctggtt gctttctatt atcatggtat ttgaccattt tagttttaat
2941 tccatgtcag ataagtgtaa atagaagagt ttaaaagcat gaaacatttc agaaggtatc
3001 agttatatga tattctttaa acaaatatga aaaatgtaaa tactcatgaa tgaaaataca
3061 tctttttgtg aaaaaaaaaa aaaaaaaaa
//