LOCUS BC039829 3692 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens integrator complex subunit 6, mRNA (cDNA clone MGC:48751 IMAGE:5736353), complete cds. ACCESSION BC039829 VERSION BC039829.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3692) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3692) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: j Column: 13. FEATURES Location/Qualifiers source 1..3692 /db_xref="H-InvDB:HIT000052260" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48751 IMAGE:5736353" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3692 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" CDS 489..3152 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /codon_start=1 /product="integrator complex subunit 6" /protein_id="AAH39829.1" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA SRGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLN RLVTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKE PFRWDQRLFALVLRLPGTMSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQ CLESLVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKT GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPL TQFILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPL LDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSY SVISYLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGI SEDVPHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKS TRRFLKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKK GMMIDEADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGP PAPTTQAQPDLIKPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASS PASLLERPTNHMEALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKK LMHCRSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEAS RFKKRMLIEQLENFLDEIHRRANQINHINSN" BASE COUNT 1135 a 819 c 792 g 946 t ORIGIN 1 gaaagtggtg acaccgccgg ggtgcggagg gagtccctga aacttctccc aacagcccca 61 gggccaatct tccctcagcc cactcccctc ttcgccagct cccaggtccc cactcctgta 121 ccgggggtgg ggtggggagc caggcccgtc tcccgctggg acacacacag gggccgggag 181 cggggacggg acccccgagg cgggggggac gaaccgacag acagacggct gggcgcccgc 241 cccagcgggc aggcaggcag gaggaggcgg aggcgggggt acgacgggga gcactgggtc 301 tggggagttt cctctcaact atcgggggag aaactccccg cagccggagg aaagacccag 361 acagtgtttt cctcccgggg gccgtgctcc cccgccccgc gtagcggcgg tcgccgccac 421 cggcgcctcc acctctacca tctcctcttt ctccaccacc tcgggccccg gtgtccccgg 481 ccagcactat gcccatctta ctgttcctga tagacacgtc tgcctctatg aaccagcgca 541 gccatctggg caccacctac ctggacacgg ccaaaggcgc ggtagagacc ttcatgaagc 601 tccgtgcccg ggaccctgcc agcagaggag acaggtatat gctggtcact ttcgaagagc 661 cgccctatgc tatcaaggct ggatggaaag aaaaccatgc aacgtttatg aatgaattga 721 aaaaccttca ggctgaagga cttacgactc ttggccaatc cctaaggaca gcttttgatt 781 tattaaattt aaatagatta gtaactggca tagacaacta tgggcaggga agaaaccctt 841 ttttcttgga gccagcaata attatcacaa ttactgatgg gagcaagttg actaccacca 901 gtggagtcca ggatgagctt catttacctc ttaattctcc tttgcctgga agtgaattga 961 ccaaggaacc ttttcgttgg gatcagagac tctttgcatt agtgttgcgg ttgcctggca 1021 ccatgtcagt agaatcagaa cagttgacag gtgtgccttt agatgactct gcaatcacac 1081 caatgtgtga agtgacaggc ggccgttcat attctgtgtg ttctccaaga atgcttaatc 1141 agtgtctgga gtccttggtg cagaaagtac aaagtggggt ggtaataaac tttgaaaaag 1201 caggaccaga tccttcccct gtagaagatg ggcagccaga tatatcaagg ccttttggat 1261 ctcagccttg gcatagctgt cacaaactca tatatgtcag accaaatcct aaaactgggg 1321 ttcctatagg tcattggcct gttccagagt ctttttggcc agatcaaaat tcgccaacac 1381 taccacctcg tacatctcat cctgtagtga agttttcctg tacagactgt gaaccaatgg 1441 ttattgataa acttcctttt gacaaatatg agttggaacc ttcaccactg actcaattta 1501 tcctggaaag gaaatctcct caaacatgtt ggcaggtgta cgtgagcaat agtgcaaaat 1561 acagtgaact tggtcatcct tttggttact tgaaagccag tacagcactg aactgtgtca 1621 acttatttgt gatgccttac aattatccag tccttcttcc cctcttagat gacttgttta 1681 aagtgcataa agcaaaacca acattgaagt ggagacagtc atttgaaagt tatttgaaga 1741 caatgcctcc ctactatctt gggcccttga agaaagctgt taggatgatg ggagcaccta 1801 acctaatagc agacagtatg gaatatggac ttagttacag tgtcatttca tacctcaaaa 1861 aactgagtca acaggccaaa atagaatctg atcgagtcat tggatctgta ggcaaaaaag 1921 tagtacagga gactggaata aaagtccgga gccgatcaca tggtttatca atggcatata 1981 ggaaagattt tcaacaactc ctccagggaa tttcagagga tgtccctcac agactgctag 2041 accttaatat gaaggaatac actgggttcc aagttgcttt gctgaataag gatttgaagc 2101 cacagacatt tagaaatgct tatgacatac caagacgaaa tcttttggat cacttaacaa 2161 gaatgagatc taatcttttg aagagcactc gcagatttct gaaaggacag gacgaagatc 2221 aagtgcacag tgttcctata gcacaaatgg ggaactacca ggaatacctc aagcaagtac 2281 cttctccact aagagaactt gatcctgatc agccacgaag gttgcataca tttggcaacc 2341 cctttaagct ggataagaag ggtatgatga tagatgaagc agatgaattt gtggctggac 2401 ctcaaaataa acataaacga cccggagaac caaatatgca agggatccct aaaagacgtc 2461 ggtgtatgtc tccactacta agaggcagac agcagaatcc tgttgtaaac aatcatattg 2521 ggggaaaagg accacctgca cctacaactc aagcacagcc agatcttatt aaacctcttc 2581 ctcttcataa aatttcagaa accactaatg attcgataat acatgatgtg gttgaaaatc 2641 atgttgcaga ccaactttca tcagacatta caccaaatgc tatggatacg gaattttcag 2701 catcttctcc agccagttta ctggaacggc caaccaatca tatggaggct cttggtcatg 2761 accatttagg aaccaatgac ctcactgttg gtggattttt agaaaatcat gaggagccaa 2821 gagataaaga acaatgtgct gaagagaaca taccagcatc ttcactcaac aaaggaaaga 2881 aattgatgca ttgcagaagc catgaagagg tcaatactga actaaaagca caaataatga 2941 aagagatccg aaagccagga agaaaatatg aaagaatctt cactttactg aagcatgtgc 3001 aaggcagttt acaaacaaga ctaatatttt tacaaaatgt cattaaagaa gcatcaaggt 3061 ttaaaaaacg aatgctaata gaacaactgg agaacttctt ggatgaaatt catcgaagag 3121 ccaatcagat caaccatatt aatagcaatt aaaagaaaat agaatgtggc cacttatttc 3181 actatcttct tcaaatacaa agtaaataca agactgttgt gatcttgcat tcattttctg 3241 acatgcattg ttggctattt gaaatactaa aagcaaatct acagatcctt tttccatcat 3301 tttacagtga ccttttcttc attttggttt atttttgtaa tgtgaaaagt atcactctaa 3361 aaaacatttt taatttaaca aactaaaaat attcctccaa atctcttgct tgtcattgac 3421 tcttgcgtgt caatttccct caggttctat tttcttaaac caacctttaa aattgtcacc 3481 tctgttaagg ttgaactttg ccaaaaaaaa agaagttact ttgtaatttt tggggaaaaa 3541 agcacataca ttaaaactag gtaatgtttt gtatatacag ttattttgga tatattattg 3601 taagttgtac aaatgtattt tgaagaatat ttaagaaaag cacttttgtt attccatcaa 3661 taaatgctct attttaaaaa aaaaaaaaaa aa //