LOCUS BC039739 2552 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens T-box 21, mRNA (cDNA clone MGC:47672 IMAGE:6067371), complete cds. ACCESSION BC039739 VERSION BC039739.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2552) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2552) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC039739.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: p Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7019548. FEATURES Location/Qualifiers source 1..2552 /db_xref="H-InvDB:HIT000052247" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47672 IMAGE:6067371" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2552 /gene="TBX21" /gene_synonym="T-bet" /gene_synonym="T-PET" /gene_synonym="TBET" /gene_synonym="TBLYM" /db_xref="GeneID:30009" /db_xref="HGNC:HGNC:11599" /db_xref="MIM:604895" CDS 177..1784 /gene="TBX21" /gene_synonym="T-bet" /gene_synonym="T-PET" /gene_synonym="TBET" /gene_synonym="TBLYM" /codon_start=1 /product="T-box 21" /protein_id="AAH39739.1" /db_xref="GeneID:30009" /db_xref="HGNC:HGNC:11599" /db_xref="MIM:604895" /translation="MGIVEPGCGDMLTGTEPMPGSDEGRAPGADPQHRYFYPEPGAQD ADERRGGGSLGSPYPGGALVPAPPSRFLGAYAYPPRPQAAGFPGAGESFPPPADAEGY QPGEGYAAPDPRAGLYPGPREDYALPAGLEVSGKLRVALNNHLLWSKFNQHQTEMIIT KQGRRMFPFLSFTVAGLEPTSHYRMFVDVVLVDQHHWRYQSGKWVQCGKAEGSMPGNR LYVHPDSPNTGAHWMRQEVSFGKLKLTNNKGASNNVTQMIVLQSLHKYQPRLHIVEVN DGEPEAACNASNTHIFTFQETQFIAVTAYQNAEITQLKIDNNPFAKGFRENFESMYTS VDTSIPSPPGPNCQFLGGDHYSPLLPNQYPVPSRFYPDLPGQAKDVVPQAYWLGAPRD HSYEAEFRAVSMKPAFLPSAPGPTMSYYRGQEVLAPGAGWPVAPQYPPKMGPASWFRP MRTLPMEPGPGGSEGRGPEDQGPPLVWTEIAPIRPESSDSGLGEGDSKRRRVSPYPSS GDSSSPAGAPSPFDKEAEGQFYNYFPN" BASE COUNT 523 a 754 c 754 g 521 t ORIGIN 1 ggacgcgtgg gcgagggcgt agaagccagg cgtcagagcc cgggctccgg tggggtcccc 61 cacccggccc tcgggtcccc cgccccctgc tccctgccca tcccagccca cgcgaccctc 121 tcgcgcgcgg aggggcgggt cctcgacggc tacgggaagg tgccagcccg ccccggatgg 181 gcatcgtgga gccgggttgc ggagacatgc tgacgggcac cgagccgatg ccggggagcg 241 acgagggccg ggcgcctggc gccgacccgc agcaccgcta cttctacccg gagccgggcg 301 cgcaggacgc ggacgagcgt cgcgggggcg gcagcctggg gtctccctac ccggggggcg 361 ccttggtgcc cgccccgccg agccgcttcc ttggagccta cgcctacccg ccgcgacccc 421 aggcggccgg cttccccggc gcgggcgagt ccttcccgcc gcccgcggac gccgagggct 481 accagccggg cgagggctac gccgccccgg acccgcgcgc cgggctctac ccggggccgc 541 gtgaggacta cgcgctaccc gcgggactgg aggtgtcggg gaaactgagg gtcgcgctca 601 acaaccacct gttgtggtcc aagtttaatc agcaccagac agagatgatc atcaccaagc 661 agggacggcg gatgttccca ttcctgtcat ttactgtggc cgggctggag cccaccagcc 721 actacaggat gtttgtggac gtggtcttgg tggaccagca ccactggcgg taccagagcg 781 gcaagtgggt gcagtgtgga aaggccgagg gcagcatgcc aggaaaccgc ctgtacgtcc 841 acccggactc ccccaacaca ggagcgcact ggatgcgcca ggaagtttca tttgggaaac 901 taaagctcac aaacaacaag ggggcgtcca acaatgtgac ccagatgatt gtgctccagt 961 ccctccataa gtaccagccc cggctgcata tcgttgaggt gaacgacgga gagccagagg 1021 cagcctgcaa cgcttccaac acgcatatct ttactttcca agaaacccag ttcattgccg 1081 tgactgccta ccagaatgcc gagattactc agctgaaaat tgataataac ccctttgcca 1141 aaggattccg ggagaacttt gagtccatgt acacatctgt tgacaccagc atcccctccc 1201 cgcctggacc caactgtcaa ttccttgggg gagatcacta ctctcctctc ctacccaacc 1261 agtatcctgt tcccagccgc ttctaccccg accttcctgg ccaggcgaag gatgtggttc 1321 cccaggctta ctggctgggg gccccccggg accacagcta tgaggctgag tttcgagcag 1381 tcagcatgaa gcctgcattc ttgccctctg cccctgggcc caccatgtcc tactaccgag 1441 gccaggaggt cctggcacct ggagctggct ggcctgtggc accccagtac cctcccaaga 1501 tgggcccggc cagctggttc cgccctatgc ggactctgcc catggaaccc ggccctggag 1561 gctcagaggg acggggacca gaggaccagg gtcccccctt ggtgtggact gagattgccc 1621 ccatccggcc ggaatccagt gattcaggac tgggcgaagg agactctaag aggaggcgcg 1681 tgtcccccta tccttccagt ggtgacagct cctcccctgc tggggcccct tctccttttg 1741 ataaggaagc tgaaggacag ttttataact attttcccaa ctgagcagat gacatgatga 1801 aaggaacaga aacagtgtta ttaggttgga ggacaccgac taatttggga aacggatgaa 1861 ggactgagaa ggcccccgct ccctctggcc cttctctgtt tagtagttgg ttggggaagt 1921 ggggctcaag aaggattttg gggttcacca gatgcttcct ggcccacgat gaaacctgag 1981 aggggtgtcc ccttgcccca tcctctgccc taactacagt cgtttacctg gtgctgcgtc 2041 ttgcttttgg tttccagctg gagaaaagaa gacaagaaag tcttgggcat gaaggagctt 2101 tttgcatcta gtgggtggga ggggtcaggt gtgggacatg ggagcaggag actccacttt 2161 cttcctttgt acagtaactt tcaacctttt cgttggcatg tgtgttaatc cctgatccaa 2221 aaagaacaaa tacacgtatg ttataaccat cagcccgcca gggtcaggga aaggactcac 2281 ctgactttgg acagctggcc tgggctcccc ctgctcaaac acagtgggga tcagagaaaa 2341 ggggctggaa aggggggaat ggcccacatc tcaagaagca agatattgtt tgtggtggtt 2401 gtgtgtgggt gtgtgttttt tctttttctt tctttttatt ttttttgaat gggggaggct 2461 atttattgta ctgagagtgg tgtctggata tattcctttt gtcttcatca ctttctgaaa 2521 ataaacataa aactgttaaa aaaaaaaaaa aa //