LOCUS BC039737 1528 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ribosomal modification protein rimK-like family member
A, mRNA (cDNA clone MGC:47816 IMAGE:6021672), complete cds.
ACCESSION BC039737
VERSION BC039737.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27735068.
FEATURES Location/Qualifiers
source 1..1528
/db_xref="H-InvDB:HIT000052246"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47816 IMAGE:6021672"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1528
/gene="RIMKLA"
/gene_synonym="RP11-157D18.1"
/db_xref="GeneID:284716"
/db_xref="HGNC:HGNC:28725"
CDS 256..1308
/gene="RIMKLA"
/gene_synonym="RP11-157D18.1"
/codon_start=1
/product="ribosomal modification protein rimK-like family
member A"
/protein_id="AAH39737.1"
/db_xref="GeneID:284716"
/db_xref="HGNC:HGNC:28725"
/translation="MDQIAVTIVGGHLGLQLNQKALTTFPDVVLVRVPTPSVQSDSDI
TVLRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDE
AEPLGYPVVVKSTRGHRGKAVFLARDKHHLSDICHLIRHDVPYLFQKYVKESHGKDIR
VVVVGGQVIGSMLRCSTDGRMQSNCSLGGVGVKCPLTEQGKQLAIQVSNILGMDFCGI
DLLIMDDGSFVVCEANANVGFLAFDQACNLDVGGIIADYTMSLLPNRQTGKMAVLPGL
SSPREKNEPDGCASAQGVAESVYTINSGSTSSESEPELGEIRDSSASTMGAPPSMLPE
PGYNINNRIASELKLK"
BASE COUNT 356 a 426 c 416 g 330 t
ORIGIN
1 ccacgcgtcc gcgggagcgg agccgtggcg cgctcgcccc ggacgccggc cgcccctccg
61 ctcgccctac tgagcgagcg gcccggggcg ccgaggggtc cgcgccgcgc ggggcgcacc
121 gccctggccg ccatgtgctc ccagctctgg ttcctgacgg accggcgcat ccgcgaggac
181 tacccgcagg tgcagatcct gcgcgccctc cggcagcgct gctccgagca ggacgtgcgc
241 ttccgggcgg tgcttatgga ccagatcgcc gtcaccatcg tcggcggcca cctcggcctc
301 cagctaaacc agaaggccct caccactttc ccggatgtgg tgcttgtacg ggtacccaca
361 ccctcagtgc agtcagacag tgacatcact gtcctgcgac acctggagaa gctgggctgc
421 cggttggtca atcgcccaca gagcatctta aattgcatca acaaattctg gacgttccaa
481 gaactggctg gacatggggt ccccatgcca gacaccttct cctatggtgg gcatgaagac
541 ttttcaaaaa tgattgatga agctgagccc ctgggctacc cagtcgtggt gaagagcaca
601 cgaggccacc ggggaaaagc tgtttttctg gcaagagata aacatcacct ctctgacatc
661 tgccatctga tccgccacga tgtgccctac ctgttccaga agtacgtgaa ggagtcccat
721 ggaaaggaca tccgggtggt ggtggtaggg ggccaggtca taggctctat gcttcgctgc
781 tccactgatg gacggatgca gagcaactgc tctctcggtg gcgtgggcgt caagtgtccg
841 ctgacagaac aaggcaagca gttggctatt caggtgtcca acatcctagg catggacttc
901 tgtggcattg atctccttat catggacgat ggctcctttg tggtgtgtga ggcaaatgct
961 aatgttggct tcctagcctt tgaccaggca tgcaacttag atgtgggtgg gatcattgca
1021 gactatacca tgtccttgct gccaaatagg cagactggaa agatggctgt cctcccagga
1081 ctgtcgagtc caagggagaa gaacgagccg gatggctgtg cttcagctca gggagttgca
1141 gagagcgtct ataccatcaa cagtgggtct acctctagcg aaagtgagcc tgaactggga
1201 gagatccggg attcctcagc aagcacaatg ggggccccac cctccatgct gcccgaacct
1261 ggctacaaca ttaacaacag gattgcttct gagttaaaac ttaagtgaat tcctgctttt
1321 tggcagcatt taaaccaaat cctactgctt ccctagtagt tttgagtgaa taaaatctgg
1381 actaatgtga tttcatttgc acagaaacta gaaatcccat ctgggcactc agcatttttt
1441 ctaacgatga tttaagcaaa tggcctagct ttgtggtttt tacaaagaca aatataaaaa
1501 cactcacaag aacaaaaaaa aaaaaaaa
//