LOCUS BC039730 2928 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens glypican 5, mRNA (cDNA clone MGC:47702 IMAGE:5744533), complete cds. ACCESSION BC039730 VERSION BC039730.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2928) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2928) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: j Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34106705. FEATURES Location/Qualifiers source 1..2928 /db_xref="H-InvDB:HIT000052241" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47702 IMAGE:5744533" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2928 /gene="GPC5" /db_xref="GeneID:2262" /db_xref="HGNC:HGNC:4453" /db_xref="MIM:602446" CDS 391..2109 /gene="GPC5" /codon_start=1 /product="glypican 5" /protein_id="AAH39730.1" /db_xref="GeneID:2262" /db_xref="HGNC:HGNC:4453" /db_xref="MIM:602446" /translation="MDAQTWPVGFRCLLLLALVGSARSEGVQTCEEVRKLFQWRLLGA VRGLPDSPRAGPDLQVCISKKPTCCTRKMEERYQIAARQDMQQFLQTSSSTLKFLISR NAAAFQETLETLIKQAENYTSILFCSTYRNMALEAAASVQEFFTDVGLYLFGADVNPE EFVNRFFDSLFPLVYNHLINPGVTDSSLEYSECIRMARRDVSPFGNIPQRVMGQMGRS LLPSRTFLQALNLGIEVINTTDYLHFSKECSRALLKMQYCPHCQGLALTKPCMGYCLN VMRGCLAHMAELNPHWHAYIRSLEELSDAMHGTYDIGHVLLNFHLLVNDAVLQAHLNG QKLLEQVNRICGRPVRTPTQSPRCSFDQSKEKHGMKTTTRNSEETLANRRKEFINSLR LYRSFYGGLADQLCANELAAADGLPCWNGEDIVKSYTQRVVGNGIKAQSGNPEVKVKG IDPVINQIIDKLKHVVQLLQGRSPKPDKWELLQLGSGGGMVEQVSGDCDDEDGCGGSG SGEVKRTLKITDWMPDDMNFSDVKQIHQTDTGSTLDTTGAGCAVATESMTFTLISVVM LLPGIW" BASE COUNT 808 a 650 c 709 g 761 t ORIGIN 1 ctgctgcgag ccgagccggg cggcggcggc agtggcggca gtggcggcag cggcagcagt 61 tgcagcagtg gtggccagag cggatgcttg cgggctccct gcggctccac tagttttctt 121 cgccccgccc agccgcccac tcttctcggc tagggaagaa gaccagaggg tgctcagctg 181 gaaaactctg gtgtctcagc ttagggcctc ctccgggaag agctaactgc tcccaggtga 241 agccggtgcc cgcgggcggt ccgtacaccc cgcagccggc tcgcaccgct cgagagcctc 301 ggccgctgtg tcttccacgt ctgcagctca gccagggcgc gcagggcgag tggggtccac 361 tggcgggtaa aggggaccag gacggcgagg atggacgcac agacctggcc cgtgggcttt 421 cgctgcctcc tccttctggc cctggttggg tccgcccgca gcgagggcgt gcagacctgc 481 gaagaagttc ggaaactttt ccagtggcgg ctgctgggag ctgtcagggg gctgccggat 541 tcgccgcggg caggacctga tcttcaggtt tgcatatcca aaaagcctac atgttgcacc 601 aggaagatgg aggagagata tcagattgcg gctcgccagg atatgcagca gtttcttcaa 661 acgtccagct ctacattaaa gtttctaata tctcgaaatg cggctgcttt tcaagaaacc 721 cttgaaactc tcatcaaaca agcagaaaat tacaccagta tacttttttg cagtacctac 781 aggaacatgg ccttggaggc tgctgcttcg gttcaggagt tcttcactga tgtggggctg 841 tatttatttg gtgcggatgt taatcctgaa gaatttgtaa acagattttt tgacagtctt 901 tttcctctgg tctacaacca cctcattaac cctggtgtga ctgacagttc cctggaatac 961 tcagaatgca tccggatggc tcgccgggat gtgagtccat ttggtaatat tccccaaaga 1021 gtaatgggac agatggggag gtccctgctg cccagccgca cttttctgca ggcactcaat 1081 ctgggcattg aagtcatcaa caccacagac tatctgcact tctccaaaga gtgcagcaga 1141 gccctcctga agatgcaata ctgcccgcac tgccaaggcc tggcgctcac taagccttgt 1201 atgggatact gcctcaatgt catgcgaggc tgcctggcgc acatggcgga gcttaatcca 1261 cactggcatg catatatccg gtcgttggaa gaactctcgg atgcaatgca tggaacatac 1321 gacattggac acgtgctgct gaactttcac ttgcttgtta atgatgctgt gttacaggct 1381 cacctcaatg gacaaaaatt attggaacag gtaaatagga tttgtggccg ccctgtaaga 1441 acacccacac aaagcccccg ttgttctttt gatcagagca aagagaagca tggaatgaag 1501 accaccacaa ggaacagtga agagacgctt gccaacagaa gaaaagaatt tatcaacagc 1561 cttcgactgt acaggtcatt ctatggaggt ctagctgatc agctttgtgc taatgaatta 1621 gctgctgcag atggacttcc ctgctggaat ggagaagata tagtaaaaag ttatactcag 1681 cgtgtggttg gaaatggaat caaagcccag tctggaaatc ctgaagtcaa agtcaaagga 1741 attgatcctg tgataaatca gattattgat aaactgaagc atgttgttca gttgttacag 1801 ggtagatcac ccaaacctga caagtgggaa cttcttcagc tgggcagtgg tggaggcatg 1861 gttgaacaag tcagtgggga ctgtgatgat gaagatggtt gcgggggatc aggaagtgga 1921 gaagtcaaga ggacactgaa gatcacagac tggatgccag atgatatgaa cttcagtgat 1981 gtaaagcaaa tccatcaaac agacactggc agtactttag acacaacagg agcaggatgt 2041 gcagtggcga ctgaatctat gacattcact ctgataagtg tggtgatgtt acttcccggg 2101 atttggtaac tgaactcttc tgtcctgaca taccttactg aagtctcgat ttcttctctc 2161 tctgcatatg cctggaataa gagatccttt ttcaatgtaa caattatatt tatgaaaaga 2221 tatgttacac taacttctca gaagccaagc tgaaatattc ataaagtccc taaaactcaa 2281 cgtttaaatg acacacttta aaaatatgtc ttttttcaat ctaactgaaa accttcttaa 2341 cttctaatat attaaatctg aagatgtgaa gggcacagaa gtgactttga ataagaagaa 2401 tttagtgtat ctgtaatttt attatcaatt ccaagcccct tcctttctaa attaaaaatg 2461 ttttcatttg aaagtgtatt tgccagacaa tgaaaacagt atgcagtatt tcttaaagta 2521 ttgaaattag aatatcatga aataaatcaa aacatacaat ggcaagtagt atgcatgcat 2581 attcaagaga ctcttccatt tttgcaagct gtagaaggaa atgtctgaat gtctataagt 2641 tatggggtag attcttgaga agcatttcat ataatttcac tgaagaacct tgataatttt 2701 gacccactgt aacttagcca ctgatgaacc ttaaagctga gtattttatt aacacctgat 2761 ttgtattcca ttatattcaa aatgcatctt tggtattgtg cctctgctcc catctctctc 2821 tttgcctcat agatttagct atgttgggaa gcacatgctt gctctaggaa tatctccaat 2881 aaagctgtta actatttggt ggaaaaaaaa aaaaaaaaaa aaaaaaaa //