LOCUS BC039708 1700 bp mRNA linear HTC 17-NOV-2006
DEFINITION Homo sapiens FYVE, RhoGEF and PH domain containing 4, mRNA (cDNA
clone IMAGE:5194873), with apparent retained intron.
ACCESSION BC039708
VERSION BC039708.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21245127
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1700
/db_xref="H-InvDB:HIT000095885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5194873"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 581 a 354 c 365 g 400 t
ORIGIN
1 ggagcacaaa gacagcgatt gttacccaat aagcagtagt cacacacttc taccaatcgc
61 cttaggaggg ctggttacca tggaatccac catctgttca ctccccaccg gaatgtgatt
121 atccttgctg ggctgggaag tggggaaagc aggggagcct gtgctgggtg agattatctg
181 caatggaccg ggttaatggg aggcttgctt tggctcgctg gaagaacaaa tgaagggagt
241 tttacttcaa ccatttgtga cttctggcca agaggaataa attcagcttt tataaggcag
301 cagtacctgt ccaaagatcg ctttagttcc accttgctcc acaagcagca caaccacact
361 ggttggtgag aatgtatctg aagaagaggc tcagggaata aatgggaaca ggccagcaaa
421 acactcagct gcaagtccaa agccacaagt gcctccaaag ccattacacc tgcagaattc
481 accttcgtcc aatatacacc aaacccccag gcataaagct ttacctagtg caaaaccaag
541 gatggaggaa attaaacctg cctctgcttc ttgtgtctca aaagaaaaac ccagtaaggt
601 atcagatctc atcagtcgct ttgaaggagg cagctcatta tcaaattata gtgatttgaa
661 gaaagagtct gctgtgaacc taaatgctcc tagaacccca ggaaggcatg gattgacaac
721 cacacctcaa caaaaactcc tctcccagca cttgccacag aggcagggaa atgatacaga
781 taagactcag ggtgcacaga cttgtgtggc caacggtgta atggcagcac aaaaccagat
841 ggaatgtgag gaggagaaag ctgccactct tagctcagat acttctattc aagcttctga
901 acccttgctt gatacgcaca tagtgaatgg agaaagagat gaaactgcca cagctcctgc
961 atcacccaca acagacagct gtgatggaaa tgcttctgac agtagctaca ggactccagg
1021 cataggccca gtgctccccc tagaagaaag aggggcagaa acagaaacca aggtacaaga
1081 gagggaaaat ggggaaagcc ctctggaact ggagcagctg gaccagcacc atgagatgaa
1141 ggtagagcat gagactagct catgagcagg gaaaaccctg cctattcgat tgttgtctta
1201 aaactcttta tttattgcac ccctgaaatg tatgaatcag atcacccaca ctggcagtta
1261 aacgattttc aagctctggc tgctgattag catttcccct atgctctaag cagatatttc
1321 actttttctt ttcatgtagt ttctgttaat atctctgttg taatttcagg agtcagaaca
1381 gtgtggaaac tttaatatag gaaatccaca aatgtattgt ttttacatag aaagaaaatg
1441 ttccttgttg ctctagatgt tggtgctgta tccctaatac ttacgggcca agcaagaaga
1501 aattgtataa tctttgttgt tcagaagttt ctaatagaat aaataggcct gtaagatgaa
1561 cttgccacta gtaaatgtta cttttaagga catgaatatg gaagtattaa attattcaac
1621 agattataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa
//