LOCUS BC039691 2180 bp mRNA linear HTC 23-JUL-2007
DEFINITION Homo sapiens tetratricopeptide repeat domain 21A, mRNA (cDNA clone
IMAGE:5215060), with apparent retained intron.
ACCESSION BC039691
VERSION BC039691.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21955236
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2180
/db_xref="H-InvDB:HIT000095879"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5215060"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 583 a 512 c 553 g 532 t
ORIGIN
1 ccgcccgccg cgatagagtg cccacgaccc tgcctcggga atcccgctct gcaccgcccc
61 accagacccg gactcggagc cgcgagcggc ccgagatgag cagcaatgac tcctccctta
121 tggctgggat catttactat agccaggaaa agtacttcca ccatgtgcag caggctgcag
181 ctgtgggcct ggaaaaattc agcaatgacc ctgtgttgaa gttctttaaa gcctatggag
241 tcctcaaaga agaccgagaa gcaattcagg agcttgagta cagcctgaag gaaatacgca
301 agacagtcag tgggactgca ctgtactatg ctggcctttt cctctggctc ataggccgcc
361 atgacaaggc caaagagtac attgaccgca tgctgaagat ttctagaggc ttcagagagg
421 caatgtactt catgatgcag cagaactact caggggccct ggaggtggtg aaccagatca
481 ctgtgacttc agggagcttc ctgccagccc tcgtcctgaa gatgcagctg ttcttagctc
541 ggcaggactg ggagcagaca gtagaaatgg gacacagaat cctagaaaaa gatgagagca
601 atattgatgc ctgccaaatt ctaaccgtgc atgagcttgc aagagaagga aacatgacca
661 cagtaagttc tttgaagact cagaaggtga tccttgaaac agaatcaagg aggaaccctt
721 catgacctgt gcacctgacc caaagccctt gtagggagct cctggatctc agcttcctct
781 tttctacccc acccctatac tcgctgccaa ggaggcctgc tctggtttga ctctttgagt
841 tgtgtagctt gggagtcagg cagcatcagg cagtgagatt gattctaggc tctgccatgt
901 gctatctgtg gaagcctggg caggtgtccc cacctggata agccgcaggc ttcctgtttg
961 taaaatagac agaattccac acaggactaa atgtgataag aagtgggaga gtttggaaca
1021 gtccctggca cactacagta attccatcaa tgttaactga tagtagaagt cgtggtagta
1081 tttctgaatt caggaaatgc ctttttttta ggggatagtt ggaactgctc aggcattggc
1141 caggtaatac tgggccccaa acatgctcgt aagtcttgta gttttccaaa gaaaccaaaa
1201 atagccctca aatgcagtca gaaacaccta gaattcttag tgaaacctca atacccagac
1261 aggttctcat tttcagaaag gtttgttttt agccaaagca ttgcctttta gatcagtgaa
1321 atatattgcc tctatggaga gcatggcaaa ccaggagtct ctaaggggtc atggtgggaa
1381 ggggaagctt ctggtttctt ctgcacagct ctgagattgt ggattttgtg ggatggggtg
1441 aggtagaggg gagagtccgt atttgggaga aaaaggcccc agcccttttc gtctctgggt
1501 aggaataaga gaataggact atcctcagct ccctgtgact ccagatccct aagcaggcct
1561 tcctggggcc tggcctgaaa gttaatccca ggggcagact tagcatttag ctaactgaga
1621 tttagcatta gccccttttt tactcccact tcaaaccttg ggacctcccc accgaccccg
1681 ggctggctac ccagttctaa ttttgttcat acttactgaa cagagtggac ccataccatc
1741 cttggttttg cttttggcac ttctctgcag ctgggaacta agaattcctt actcctgggt
1801 ggggagtggg aaagaaccta agctttggaa tctgtcagtg acctaggtgg ctgggtgacc
1861 tcagaccaat tgcctaacct ttctaacctt tcatgtgttg gacaggaagg tttggaaagt
1921 tcgaatagtt atactgactt acatttgatt catgtcaaaa tggagcagag gcttctgggc
1981 cagcactagt tagtttgctg ctggcctggc aggctgcact gtggacacag tgagggctag
2041 ctcctggctc tgcctgggtg ggtctgaaaa ggcaacttct cttcacaaac tcaggaacag
2101 ggctactcta tgggttagcc ctgctccata aggagcagtc aaaaaaaaaa aaaagaaaaa
2161 aaaaaaaaaa aaaaaaaaaa
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