LOCUS BC039652 2237 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens sterile alpha motif domain containing 4B, mRNA (cDNA
clone IMAGE:5018567), partial cds.
ACCESSION BC039652
VERSION BC039652.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2237)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2237)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: m Column: 8.
FEATURES Location/Qualifiers
source 1..2237
/db_xref="H-InvDB:HIT000095852"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5018567"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2237
/gene="SAMD4B"
/gene_synonym="FLJ10211"
/gene_synonym="MGC99832"
/gene_synonym="SMGB"
/db_xref="GeneID:55095"
/db_xref="HGNC:HGNC:25492"
CDS <1..1100
/gene="SAMD4B"
/gene_synonym="FLJ10211"
/gene_synonym="MGC99832"
/gene_synonym="SMGB"
/codon_start=3
/product="SAMD4B protein"
/protein_id="AAH39652.1"
/db_xref="GeneID:55095"
/db_xref="HGNC:HGNC:25492"
/translation="MMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVL
EGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAH
PGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNY
RQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRH
ALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPV
PGPDLEINPTLESLCLSMTEHALGGPSRDLC"
BASE COUNT 498 a 716 c 565 g 458 t
ORIGIN
1 agatgatgac actgactgag cagcacctgg agtctcagaa cgtcaccaaa ggtgcccgcc
61 acaagatagc cctgagcatc cagaagctgc gtgagagaca gagcgtcctc aagtccctag
121 agaaggatgt gctggaaggc gggaacctac gaaacgctct gcaggagctg cagcagatca
181 tcatcactcc catcaaggcc tacagtgtcc tccaggccac cgtggctgcc gccaccacca
241 cccctactgc caaggatggg gccccggggg aaccaccgct gccaggtgct gagcctcccc
301 tagcccaccc cggcacagac aaaggcaccg aggccaagga ccctccagct gtggagaact
361 acccacctcc accagctcca gctcccactg atggcagtga gcctgccccg gctcccgtcg
421 ccgacggaga catccccagc cagtttacac gggtgatggg caaagtgtgc acccaactgc
481 tggtgtcccg accagacgag gagaacatca ccagttacct ccagctcatc gaaaagtgcc
541 tgactcatga ggctttcacg gagacgcaga agaaacggct gctatcctgg aaacagcaag
601 tgctgaagct cctccggaca ttcccgcgca aagccgcact agagatgcag aactaccggc
661 agcagaaagg ctgggcattc ggctccaact cgctccccat agctggctct gtggggatgg
721 gagtggcccg gcgtacccag cggcagttcc caatgcctcc ccgggccctc ccacccggcc
781 ggatgggcct cctgagcccc tcgggcattg ggggtgtctc ccctcgacat gccctcacca
841 gccccagcct tggaggccag ggccgacaga acctgtggtt tgccaaccct ggaggcagca
901 acagcatgcc cagtcagagc cgcagctctg tgcagcgcac ccactcgctc ccggtccact
961 cgtcacccca ggccattctc atgttccctc cagactgccc ggttcctggg cctgacctgg
1021 agatcaatcc cactctggag tctctgtgtc tgagcatgac agaacacgcc ttgggtggcc
1081 cgtcgaggga tctctgctga ggcccgggga gttgggggca gccaggataa agggggcagg
1141 gactggccag actgcctgcc tctctccttt ccttcctcat ccccacctgg tcccatccca
1201 cccctgcctc ctccagaccg ctgaccacct gcctctcccc aagggagcag actccccaga
1261 gacaaactga ccactacctt gtggagcctg ctcagaaaca tttgacattt ggggtgacgc
1321 gcagggcaga gaacctgccc tccagaatgt tattgagagg agctggggag aaggaagggg
1381 agcaaggaga ggaagctctc tctcctctcc ctgcttcccc ttcaccattc cccacattct
1441 gcaaggacag gagccacctt cctctctctc acctcccctg gccctgttca ccagaggttc
1501 tctatgatta atttcttagg cctatttaag atacatattt atatagttct taacggtttt
1561 tctctgatca tttcctctca tttttagaat ccccaggtct ctctcagcca agacagtggc
1621 agggagagcc tgaactttat gaggggagag ggcagagccc cctcctccag accctcaagc
1681 tctaacccat tttcctccag ccctggctac ccggatgaag aggttggagg tgggcagcca
1741 gggtagccag tgaggtcagg aagtctgttg ccttaacgtc cccttcccca cgaacacaca
1801 cccttctccg ctcccaggtc tggttggtga gacttgggag tcaggaataa gggaaagggg
1861 attgtttggt ttttgggttt ttccctaagc ccctcccttt tctttcagcc tttttccttc
1921 ccccattatg tcatgacctc acttaagtgg aacactatat cataacccag agattcgtcc
1981 cagccccaga gtccgacaga ctgtctggtc cctattccta atgaggggtt gtgttggggc
2041 ccaggtggag ggaggggatt tgggggttca gactgcgggg aagccagggt ctccctcttc
2101 aacgccctcc tccccctcaa cccaccttcc caactgggac attctcaagc ttttcacacc
2161 gaaaaggaaa aaaaatgtta tttttagata cattttatga ataacttttg ttatgaaaaa
2221 aaaaaaaaaa aaaaaaa
//