LOCUS BC039610 1814 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase), mRNA (cDNA clone IMAGE:5495336), partial cds. ACCESSION BC039610 VERSION BC039610.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1814) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1814) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: f Column: 15. FEATURES Location/Qualifiers source 1..1814 /db_xref="H-InvDB:HIT000095844" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5495336" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1814 /gene="PTPN13" /gene_synonym="FAP-1" /gene_synonym="PNP1" /gene_synonym="PTP-BAS" /gene_synonym="PTP-BL" /gene_synonym="PTP1E" /gene_synonym="PTPL1" /gene_synonym="PTPLE" /db_xref="GeneID:5783" /db_xref="MIM:600267" CDS 1..>1814 /gene="PTPN13" /gene_synonym="FAP-1" /gene_synonym="PNP1" /gene_synonym="PTP-BAS" /gene_synonym="PTP-BL" /gene_synonym="PTP1E" /gene_synonym="PTPL1" /gene_synonym="PTPLE" /codon_start=1 /product="PTPN13 protein" /protein_id="AAH39610.1" /db_xref="GeneID:5783" /db_xref="MIM:600267" /translation="MDEATYSSSQDHQTPKQESSSSVNTSNKMNFKTFSSSPPKPGDI FEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGV SLEGATHKQAVETLRNTGQVVHLLLEKGQSPTSKEHVPVTPQCTLSDQNAQGQGPEKV KKTTQVKDYSFVTEENTFEVKLFKNSSGLGFSFSREDNLIPEQINASIVRVKKLFPGQ PAAESGKIDVGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRPPPGVLPEIDT ALLTPLQSPAQVLPNSSKDSSQPSCVEQSTSSDENEMSDKSKKQCKSPSRRDSYSDSS GSGEDDLVTAPANISNSTWSSALHQTLSNMVSQAQSHHEAPKSQEDTICTMFYYPQKI PNKPEFEDSNPSPLPPDMAPGQSYQPQSESASSSSMDKYHIHHISEPTRQENWTPLKN DLENHLEDFELEVELLITLIKSEKGSLGFTVTKGNQRIGCYVHDVIQDPAKSDGRLKP GDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLELPRIPMLPHLLPDITLTC NKEELGFSLCGGHDSLYQVVYISDINPRSVAAIEKKKK" BASE COUNT 608 a 380 c 383 g 443 t ORIGIN 1 atggatgaag ccacttactc cagcagtcag gatcatcaaa caccaaaaca ggaatcttcc 61 tcttcagtga atacatccaa caagatgaat tttaaaactt tttcttcatc acctcctaag 121 cctggagata tctttgaggt tgaactggct aaaaatgata acagcttggg gataagtgtc 181 acgggaggtg tgaatacgag tgtcagacat ggtggcattt atgtgaaagc tgttattccc 241 cagggagcag cagagtctga tggtagaatt cacaaaggtg atcgcgtcct agctgtcaat 301 ggagttagtc tagaaggagc cacccataag caagctgtgg aaacactgag aaatacagga 361 caggtggttc atctgttatt agaaaaggga caatctccaa catctaaaga acatgtcccg 421 gtaaccccac agtgtaccct ttcagatcag aatgcccaag gtcaaggccc agaaaaagtg 481 aagaaaacaa ctcaggtcaa agactacagc tttgtcactg aagaaaatac atttgaggta 541 aaattattta aaaatagctc aggtctagga ttcagttttt ctcgagaaga taatcttata 601 ccggagcaaa ttaatgccag catagtaagg gttaaaaagc tctttcctgg acagccagca 661 gcagaaagtg gaaaaattga tgtaggagat gttatcttga aagtgaatgg agcctctttg 721 aaaggactat ctcagcagga agtcatatct gctctcaggg gaactgctcc agaagtattc 781 ttgcttctct gcagacctcc acctggtgtg ctaccggaaa ttgatactgc gcttttgacc 841 ccacttcagt ctccagcaca agtacttcca aacagcagta aagactcttc tcagccatca 901 tgtgtggagc aaagcaccag ctcagatgaa aatgaaatgt cagacaaaag caaaaaacag 961 tgcaagtccc catccagaag agacagttac agtgacagca gtgggagtgg agaagatgac 1021 ttagtgacag ctccagcaaa catatcaaat tcgacctgga gttcagcttt gcatcagact 1081 ctaagcaaca tggtatcaca ggcacagagt catcatgaag cacccaagag tcaagaagat 1141 accatttgta ccatgtttta ctatcctcag aaaattccca ataaaccaga gtttgaggac 1201 agtaatcctt cccctctacc accggatatg gctcctgggc agagttatca accccaatca 1261 gaatctgctt cctctagttc gatggataag tatcatatac atcacatttc tgaaccaact 1321 agacaagaaa actggacacc tttgaaaaat gacttggaaa atcaccttga agactttgaa 1381 ctggaagtag aactcctcat taccctaatt aaatcagaaa aaggaagcct gggttttaca 1441 gtaaccaaag gcaatcagag aattggttgt tatgttcatg atgtcataca ggatccagcc 1501 aaaagtgatg gaaggctaaa acctggggac cggctcataa aggttaatga tacagatgtt 1561 actaatatga ctcatacaga tgcagttaat ctgctccggg ctgcatccaa aacagtcaga 1621 ttagttattg gacgagttct agaattaccc agaataccaa tgttgcctca tttgctaccg 1681 gacataacac taacgtgcaa caaagaggag ttgggttttt ccttatgtgg aggtcatgac 1741 agcctttatc aagtggtata tattagtgat attaatccaa ggtccgtcgc agccattgaa 1801 aaaaaaaaaa aaaa //