LOCUS BC039577 1961 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens paraneoplastic antigen MA1, mRNA (cDNA clone MGC:48703
IMAGE:4431875), complete cds.
ACCESSION BC039577
VERSION BC039577.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1961)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52486264.
FEATURES Location/Qualifiers
source 1..1961
/db_xref="H-InvDB:HIT000052209"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48703 IMAGE:4431875"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1961
/gene="PNMA1"
/gene_synonym="MA1"
/db_xref="GeneID:9240"
/db_xref="HGNC:HGNC:9158"
/db_xref="MIM:604010"
CDS 90..1151
/gene="PNMA1"
/gene_synonym="MA1"
/codon_start=1
/product="paraneoplastic antigen MA1"
/protein_id="AAH39577.1"
/db_xref="GeneID:9240"
/db_xref="HGNC:HGNC:9158"
/db_xref="MIM:604010"
/translation="MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMP
QVSYRMLGRMFWREENAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFL
ERLHLFLAREGWTVQDVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKR
LTLFSGRDIPGPGEETFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILK
SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVV
EKGAIDKDNVNQARLEQVIAGANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAK
EEEEEAEATLLQLGLEGHF"
BASE COUNT 522 a 398 c 531 g 510 t
ORIGIN
1 tgggtggtcg tgtctggtat tgttctaagg ccaggagcac ggtgagccac agtctgttgg
61 tagaatttgg cgtcttgata gttgagaaaa tggcgatgac actgttggaa gactggtgcc
121 gggggatgga tgtgaactcc cagagagctc tgttagtctg gggcatccca gtgaactgtg
181 atgaggctga aatcgaagag accctccagg ctgcgatgcc ccaggtctcc taccgaatgc
241 ttgggagaat gttctggagg gaagaaaatg cgaaagcagc cttattagag ctcactggcg
301 ctgtagatta cgccgcgatc cccagggaga tgccgggcaa aggaggggtc tggaaagtgt
361 tatttaagcc cccaacttct gatgctgaat ttttagaaag attgcacctc ttcctagcta
421 gagaggggtg gaccgtgcaa gatgttgccc gtgtccttgg gtttcagaac cctactccga
481 ccccgggccc agagatgcca gcagagatgc taaactatat tttggataat gttattcagc
541 ctcttgttga gtccatatgg tacaagaggc tgacactttt ctcggggagg gacatcccag
601 ggcctggaga ggaaaccttt gatccctggc tggagcacac taatgaggtc ctagaggagt
661 ggcaggtgtc cgatgtagaa aagaggcggc ggttgatgga gagtcttaga ggccccgccg
721 ctgatgttat tcgcatcctt aagtccaaca accccgcgat aaccactgcc gaatgcctga
781 aggcgcttga gcaggtgttt gggagcgttg agagctctag ggatgcccag atcaaatttc
841 tgaacactta tcagaacccg ggagaaaaat tgtctgctta tgtcattcgt ctggagcctc
901 tgctacagaa ggtggtagag aagggggcca ttgataaaga taatgtgaac caggcccgcc
961 tagagcaggt cattgccggg gccaaccaca gcggggccat ccgaaggcag ctgtggctta
1021 ccggggctgg ggaagggcca gccccaaacc tctttcagtt gctggtgcag atccgtgagg
1081 aggaagccaa ggaggaggag gaggaggctg aggccaccct tctgcagtta ggcctggaag
1141 ggcacttctg agtgccagga aaggcagctt tagtgcagac ctagatcaca gctacttttc
1201 ttgtccctgt ggggtcttac agatgtgtct ctgagtagta aaggcttagc cttgttctgt
1261 tttgttgttt tttggagggg aaggttagtc aggcctgagt attcatgtaa cattctaaaa
1321 ttgtgccagc gagcaccgtg aacgactgca atgcaagcgg gtcttgctgg ctaaaatgcc
1381 aggtaaaggg ttggttggac acagcgctta gtgcacgctg tcatcatgga catcataatc
1441 agttgtgaaa aacacgcgaa cctatgacac ttcttattcc acactgaatg tgaaattgca
1501 tgttcagatg tttactacga ggcctggctc acaggaagtg ttcagtaaaa gtatgcactg
1561 ttagattact gataacgcgg atagattttt gtttaccata aattgttcca gatttatatt
1621 aatggaagga agtgtgcatt tattagctat tactcaactt tacaatgcaa acatcttatt
1681 tctcatcttt aaacatgtcg acaagtttaa ttgaaaagta ttctgagact gcaaaatggg
1741 gtgttaaaaa atactgcagt tacggagctg tgtaaaccag tttctcattg cataagatac
1801 agatgtaaat tgcatggaga ggttgatatg cacctgtaca gtaattcact cccccatttc
1861 acatctttgt cagagaatag ttcttgttca tactgagtgt tctaaatttg aagttatata
1921 tacaaattaa aatattttaa aaattcaaaa aaaaaaaaaa a
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