LOCUS BC039488 1964 bp mRNA linear HUM 29-JUL-2008
DEFINITION Homo sapiens family with sequence similarity 178, member B, mRNA
(cDNA clone IMAGE:5539102), partial cds.
ACCESSION BC039488
VERSION BC039488.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1964)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1964)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: e Column: 20.
FEATURES Location/Qualifiers
source 1..1964
/db_xref="H-InvDB:HIT000095752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5539102"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1964
/gene="FAM178B"
/db_xref="GeneID:51252"
/db_xref="HGNC:HGNC:28036"
CDS <1..1558
/gene="FAM178B"
/codon_start=2
/product="FAM178B protein"
/protein_id="AAH39488.1"
/db_xref="GeneID:51252"
/db_xref="HGNC:HGNC:28036"
/translation="DPKRGLALPEKLFWNTSGLSQQAAAPEFSWGGSGSYFNNLDYLL
QEKREQALEQERERLLLQECLNLNSLDLDEEEVPLTPEHRMLVEKYSVSLQTIPPVHP
GETVFLPRCHPLPCILDSSLLKPRSHLEGLFLSSPPAQQLSFLRSGLLNILYLHMPDC
PVSLLQWLFQLLTWPPETSLGAFGLLWDLIVDGIFLQPDEDKHLWCPSLQEVREAFHS
LGAHSPALYPLGPFWHGGRVLPGEAGLNENEEQDAPQEIALDISLGHIYKFLALCAQA
QPGAYTDENLMGLIELLCRTSLDVGLRLLPKVDLQQLLLLLLENIREWPGKLQELCCT
LSWVSDHHHNLLALVQFFPDMTSRSRRLRSQLSLVVIARMLGQQEMLPLWQEKTQLSS
LSRLLGLMRPSSLRQYLDSVPLPPCQEQQPKASAELDHKACYLCHSLLMLAGVVVSCQ
DITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKDLATQTYIRWQELLTHCQPQ
AQYFSPWKDI"
BASE COUNT 390 a 655 c 530 g 389 t
ORIGIN
1 ggacccgaag aggggcctgg ccttgccaga gaagctgttc tggaacacgt caggcctgag
61 ccagcaggct gcggccccag agttttcctg ggggggctca ggaagctact tcaacaacct
121 ggactactta ctgcaggaga agagggaaca ggccctggag caggagcgag agaggctgct
181 tctgcaggag tgtctcaatc tcaactcctt ggatcttgat gaagaggaag tgccactcac
241 acccgagcac aggatgctgg tggaaaagta ctcagtgtcc ctgcagacca tcccgccggt
301 ccatccaggt gagactgtgt ttctgcccag gtgtcacccc ctgccatgca tcctggactc
361 ctcactcctg aagccacgca gccacctgga agggctgttc ctcagctccc cgccagccca
421 acagctctcc ttcctgcgca gtggcctcct gaacatcctc tacctgcaca tgcctgactg
481 cccggtgtcc ctgctccagt ggctgttcca gctgctgaca tggcctccag aaacgtcttt
541 gggagccttt ggtcttctgt gggatctcat tgtggatgga atcttccttc agcctgatga
601 agacaagcac ctgtggtgcc cctcactgca agaagtcagg gaggcattcc acagcctggg
661 tgcccacagt cctgccctgt accctctggg gcccttttgg cacggtggca gggtgcttcc
721 aggcgaggct ggcctgaatg agaatgagga gcaggacgct ccccaagaga ttgccttgga
781 catcagcctg ggccacatct acaagtttct ggcgctgtgt gcccaggccc agccgggggc
841 ctacactgat gagaacctca tgggactgat tgagctgctg tgccgcacca gcctggacgt
901 ggggctccgc ctgctgccca aagttgacct ccagcagctt ctcctcttgc tcctggagaa
961 catccgggag tggccaggga agctccagga actgtgctgc accctgagct gggtgtctga
1021 ccaccaccac aacctgctgg ccctcgtgca gttcttccca gacatgacct cccggagcag
1081 gcggcttcga agccagctca gccttgtggt cattgctcga atgctgggcc agcaggagat
1141 gctccctctc tggcaagaga agacccagct gtcctcgctc agccggctcc tgggcctcat
1201 gaggccatca tctctcaggc aatacctgga ctctgtgccc ttgccaccct gccaggagca
1261 acagccaaag gctagtgccg agctagacca caaggcctgc tacctgtgcc acagcttgct
1321 gatgctggcc ggggtagttg ttagctgcca ggacatcact ccagaccagt ggggcgagct
1381 gcagctgctg tgcatgcagt tggaccgcca catcagcacg cagatccggg agagccccca
1441 ggccatgcac cgcaccatgc tcaaggacct ggctacccag acctacatcc gttggcagga
1501 gctgctgacc cactgccagc cccaggccca gtatttcagc ccctggaaag acatctaaag
1561 ggacagggtc agggcagccc agggctcctg gcttcagcag gaagtgaaca ggctcaggga
1621 actggaggaa gcgaagcatc aaggccagag gaggccacat gctgaccagc ctgatgaggc
1681 aagagcctgc ccctgccacc gccccgaccc ctctcctctc tgcaagagcc tgcctctgcc
1741 accgccccga ccccctctcc tctcagcaag ggatgggcct ctctgcctcg cccacccctc
1801 agccctcctc ccagccatct cctcttccct aaggcctctg tctccatagc tctggtttcc
1861 ctgggcctca gtcctcccca ccctccttcc tctgtctccc tgtcactaat gtgaggtttc
1921 tttgtgcaca ttaaagtctt ctttcagcaa aaaaaaaaaa aaaa
//