LOCUS BC039454 1128 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens cDNA clone IMAGE:5312038, with apparent retained intron. ACCESSION BC039454 VERSION BC039454.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1128) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1128) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 77 Row: p Column: 23 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1128 /db_xref="H-InvDB:HIT000095720" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5312038" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 308 a 277 c 271 g 272 t ORIGIN 1 actgaacacc agctgctctc ttcctctctg gctcccatgg cagccatggt ctgttgcaga 61 gagaagagga ttgcctgttc cctctttaag ggaacctccg ttttgctttc tggaaccact 121 ctcttaatgc cgcctgtcaa aaccagctag gactccctgg ggtccaatcc ctctgtgttt 181 aatcttctgt catctctgtc ccacctggct catcagggag gtgcagaagg ctgaagagag 241 caaagtccct gaggactcac tggaggaatg tgccatcact tgttcaaata gccacggccc 301 ttgtgactcc aaccagcctc acaagaacat caaaatcaca tttgaggaag acgaagtcaa 361 ctcaactctg gttgtagaca gagaatcctc tcatgatgaa tgtcaggatg ctctaaacat 421 tctcccaggt agcctctatt ttccttgtgt ctcatacctc tgtctaggct atggaagatc 481 aattctgagg acaggctgta tatacacata ttgttattgt tttagtcaga aactaggatg 541 gagctaggtg ctgtgactca cacatataat cacagcactt tggaaggccc aagtgggacg 601 atgacttgag ttcaggagtt gaagaccagc ctacacaata tggtgaaacc catctttaca 661 aagaatacaa aaaattaggc aggcgcacgc ctatagtccc aactgctcag gagacttagg 721 tgggaggatg ggctgagatg atcctcccac tctcattcac ttctgtcagg ctagactctc 781 tctccttttc attggcttgt cttagctatt aataagtctc ggctgggcgc agtgggtcac 841 acctgtaatc cgagcacttt gggaggccga ggcgggtgga tcatgaggtc aggagattga 901 gaccatcctg gctaacacgg tgaaaccccg tctttactaa aaatacaaaa aaaaaaaaaa 961 aaaatagctg ggcgtggtgg tgggcgcctg tagtcccagc tactcaggag gctgaggcag 1021 gagaatggca tgaacccagg aaccggagct tgcagtgagc cgagattgtg ccactgcact 1081 ccagcctggg agacagagcg agactccatc tcaaaaaaaa aaaaaaaa //