LOCUS BC039342 2127 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens spermatogenesis associated 4, mRNA (cDNA clone
IMAGE:5268782), complete cds.
ACCESSION BC039342
VERSION BC039342.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: g Column: 5
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2127
/db_xref="H-InvDB:HIT000095612"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5268782"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2127
/gene="SPATA4"
/gene_synonym="MGC33432"
/gene_synonym="TSARG2"
/db_xref="GeneID:132851"
CDS 1597..1995
/gene="SPATA4"
/gene_synonym="MGC33432"
/gene_synonym="TSARG2"
/codon_start=1
/product="SPATA4 protein"
/protein_id="AAH39342.1"
/db_xref="GeneID:132851"
/translation="MRLPLVSRSTVSKSIKDNIRLSELLSNPNMLTNELKAKFLILLH
MLQRKLGRKLNPEWFDVKPTVGEVTLNHLPAQASGRRYNLKVKRGRVVPVLPNIGSGV
SSHREIHVKQAGQHSYYSAMKPIRNMDKKP"
BASE COUNT 715 a 404 c 394 g 614 t
ORIGIN
1 tgctgtaatc ccagctactg gggaggctgc aggcaggaga atgcttgaac ccgggaggcg
61 gaggttgctg tgagtcgaga ttatgccgct gcactccagc ctaggtggca gggtaagact
121 ctgtctcaaa aaaaaaaaaa aaaaaaaaaa aaaaatactg gtaaggatca gtttaccctt
181 tgtcggagat ggcatctagt ttgagagtta ccaacaagtt tttaaagttg ctgcttaatt
241 gtaggcactt tgtatgtaac tggcagctaa tatttgctct gggaatgcaa actaaattct
301 ataaaaaggc aatgaatctt ttgcagaact ctggtttaaa gtagtctctc cttatcagag
361 aggcataggt tccaagatcc ccagtggatg gcaactgtgg atactacaga accctctgtc
421 agaacacatt tctgtttatg tcttccatcc acaaatttaa tgccttttta aaaatcttaa
481 ctaagcactt atcacacact gtggctgaaa gtttttcagt ttgaggtgtg atgccgaaac
541 tatcaagaat ttctttttct tcatatttca ggaatatgat tcattcctac cattgtaacc
601 attcttacaa ctttctatta agtcaagaac tttcatcttt tcacctaaag gaataatttt
661 atggtttctc tctggcatat ctgaatcacc agcatcactg ctcttgcact ttgcacacaa
721 gcgcaccaca ctgtacagtt gatctgatga ctaaaaggtg actgatgtct acaacgtgga
781 gactctggac aaagggagga ctcacatcct aggcaacaca gagcaggcag ggaggtttca
841 tcagactgcc cagaacagag tacaatttaa aagttacaaa ttatttcttg aattttccat
901 ttaatatttt ccgactgtga ttgacccaag gtaactgaaa ctgcagaaag caaaactgca
961 gataagcggg ggactagttt actaatttgt cttcagtatt acttacaacc atgcctctga
1021 aattttaaag tgcatatgaa tcacctgggg atcttcttga aatgcggatt caatacaaat
1081 taacagtttg ggttcatcaa aagaacacca aagcctttga aacgtagata atcttagcaa
1141 aattccacag taggttctcc ttagagcaac gatccaacaa cactcacttt acaagatact
1201 tttagtatgg aatattagac tagtattaat tataaaataa tacaaactgc ataattaact
1261 acactttatt tcatttccta attgccacgg atcagagatt tttcaaatgg cttcctaatt
1321 gcagaaatat tctgtatata ttacccctgg gaacttgaat tatcatcctt tgaaaacggg
1381 acctctttaa aagtcaagtt ggataactgg gcacagttgg agaagttcct ggcaagaaaa
1441 aaatttaaat tacctaaaga actaatccat ggaacaattc attgtaaagc tggagtgcct
1501 gaaatattga tagaagaggt ttacacttta ttaacacatc gagaaattaa aagtatccag
1561 gatgactttg tgaatttcac ggactatagc taccagatgc gtttacccct ggtttccagg
1621 tctacagttt cgaagtctat taaagataac attaggttat cagaattact aagcaatccc
1681 aacatgctga ccaatgaact taaagcgaag ttcctcatcc ttttacatat gttgcaaaga
1741 aaattaggca gaaaattgaa tccagaatgg tttgatgtga aaccaacagt gggagaagtt
1801 actctcaatc accttcctgc ccaagcctct gggcgcagat ataatttaaa agttaaaaga
1861 ggaagagttg tccctgtttt accaaatata ggtagtggtg tcagttcaca tagagaaata
1921 catgtgaagc aagctggaca acattcttat tactctgcta tgaaacctat cagaaacatg
1981 gacaagaaac cttgaaaagc acctgtcaaa tggctttgaa gaagtgatgc caccatctct
2041 agccataata aagaaacaga atcacctagt attggatgta tttcaataat aaatagagtg
2101 gtgtcttttc caaaaaaaaa aaaaaaa
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