LOCUS BC039299 2763 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens stress-induced-phosphoprotein 1, mRNA (cDNA clone
MGC:39562 IMAGE:4830381), complete cds.
ACCESSION BC039299
VERSION BC039299.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2763)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2763)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2763
/db_xref="H-InvDB:HIT000095578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39562 IMAGE:4830381"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2763
/gene="STIP1"
/gene_synonym="HOP"
/gene_synonym="IEF-SSP-3521"
/gene_synonym="P60"
/gene_synonym="STI1"
/gene_synonym="STI1L"
/db_xref="GeneID:10963"
/db_xref="HGNC:HGNC:11387"
/db_xref="MIM:605063"
CDS 554..2326
/gene="STIP1"
/gene_synonym="HOP"
/gene_synonym="IEF-SSP-3521"
/gene_synonym="P60"
/gene_synonym="STI1"
/gene_synonym="STI1L"
/codon_start=1
/product="STIP1 protein"
/protein_id="AAH39299.1"
/db_xref="GeneID:10963"
/db_xref="HGNC:HGNC:11387"
/db_xref="MIM:605063"
/translation="MESGSPMGEVEISRTIRTNGRGQRGYDWQCKRPIRVAEVRSSLH
SWSLRWVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQ
KAYEDGCKTVDLKPDWGKGYSRKAAALELLNRFEEAKRTYEEGLKHEANNPQLKEGLQ
NMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQ
DPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEEDLPENKKQALKEK
ELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE
VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKI
LKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAAC
YTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC
KEAADGYQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALS
EHLKNPVIAQKIQKLMDVGLIAIR"
BASE COUNT 765 a 749 c 766 g 483 t
ORIGIN
1 gaattcccct cggccctaca ggaccaaacg accggcgcgc tgagaaaggg tgtgcggttc
61 cactgaggac gcccaagcgg gacagccggg cccgccgcgg tgagatcccc ggcctgtcca
121 gcccaagccc aagcgccctc gcggtcacgt ggcatttccg gaacattcag aacctaacag
181 ccaggaggca ggagggccgg gccgaggccg gagcgctgga caacgcgggt agctggcgct
241 cgagggacaa gcagctccca ccggctagga cccccatccc gatgcgcggg cgaagggctg
301 gggccctgtg ccgctggcga tcccggggac cgcctggaac tcgcggcact cgggagcgag
361 agggaaagca acccagaggc cccgcagccg ccggcgacac agctacagac cccgactgca
421 gccggtactc ccatatatca ggggcggggc gaaacccggc cttttgaagg gcagcgattt
481 aaaccaatca gcgcaaagag ttggcaaccc tccgcccaat tggaatcgct ctcattctga
541 aggcggttcc gacatggagt ccggcagccc aatgggagag gtggaaattt ccagaacgat
601 cagaaccaat gggcgcggcc agcgcggcta cgattggcag tgcaaaagac caatccgtgt
661 cgcagaagtt cgctcctccc tccattcgtg gagcctgaga tgggtcaatg agctgaagga
721 gaaaggcaac aaggccctga gcgtgggtaa catcgatgat gccttacagt gctactccga
781 agctattaag ctggatcccc acaaccacgt gctgtacagc aaccgttctg ctgcctatgc
841 caagaaagga gactaccaga aggcttatga ggatggctgc aagactgtcg acctaaagcc
901 tgactggggc aagggctatt cacgaaaagc agcagctcta gagctcttaa accgctttga
961 agaagccaag cgaacctatg aggagggctt aaaacacgag gcaaataacc ctcaactgaa
1021 agagggttta cagaatatgg aggccaggtt ggcagagaga aaattcatga accctttcaa
1081 catgcctaat ctgtatcaga agttggagag tgatcccagg acaaggacac tactcagtga
1141 tcctacctac cgggagctga tagagcagct acgaaacaag ccttctgacc tgggcacgaa
1201 actacaagat ccccggatca tgaccactct cagcgtcctc cttggggtcg atctgggcag
1261 tatggatgag gaggaagaga ttgcaacacc tccaccacca ccccctccca aaaaggagac
1321 caagccagag ccaatggaag aagatcttcc agagaataag aagcaggcac tgaaagaaaa
1381 agagctgggg aacgatgcct acaagaagaa agactttgac acagccttga agcattacga
1441 caaagccaag gagctggacc ccactaacat gacttacatt accaatcaag cagcggtata
1501 ctttgaaaag ggcgactaca ataagtgccg ggagctttgt gagaaggcca ttgaagtggg
1561 gagagaaaac cgagaagact atcgacagat tgccaaagca tatgctcgaa ttggcaactc
1621 ctacttcaaa gaagaaaagt acaaggatgc catccatttc tataacaagt ctctggcaga
1681 gcaccgaacc ccagatgtgc tcaagaaatg ccagcaggca gagaaaatcc tgaaggagca
1741 agagcggctg gcctacataa accccgacct ggctttggag gagaagaaca aaggcaacga
1801 gtgttttcag aaaggggact atccccaggc catgaagcat tatacagaag ccatcaaaag
1861 gaacccgaaa gatgccaaat tatacagcaa tcgagctgcc tgctacacca aactcctgga
1921 gttccagctg gcactcaagg actgtgagga atgtatccag ctggagccga ccttcatcaa
1981 gggttataca cggaaagccg ctgcgctgga agcgatgaag gactacacca aagccatgga
2041 tgtgtaccag aaggcgctag acctggactc cagctgtaag gaggcggcag acggctacca
2101 gcgctgtatg atggcgcagt acaaccggca cgacagcccc gaagatgtga agcgacgagc
2161 catggccgac cctgaggtgc agcagatcat gagtgaccca gccatgcgcc ttatcctgga
2221 acagatgcag aaggaccccc aggcactcag cgaacactta aagaatcctg taatagcaca
2281 gaagatccag aagctgatgg atgtgggtct gattgcaatt cggtgatgac ttgttcatcc
2341 ccccttccct tcgccctcat gtggaaagag gagctgggac cgcggcgagc agcacggagc
2401 ggaagggaga gcaggggaga gaaggcctca tctctctata tttatacata accccgggga
2461 agacacagag actcgtacct gcgctgtttg tgccgccgct gcctctgggc cctcccagca
2521 cacgcatggt ctcttcaccg ctgccctcga gttccatgtc tctttcccct gcccctagtt
2581 gctgtctcgg ctgctctccc atagttggtt ttttttttat ttggggcagt gggcatgtta
2641 tggggagggg agggggttct tccagcctca ggtcccagct gtctcacgtt gtttattctg
2701 cgtccccttc tccaataaaa caagccagtt gggcgtggtt ataaaaaaaa aaaaaaaaaa
2761 aaa
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