LOCUS BC039292 3468 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens IQ motif containing H, mRNA (cDNA clone MGC:39471
IMAGE:5270043), complete cds.
ACCESSION BC039292
VERSION BC039292.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3468)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3468)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232474.
FEATURES Location/Qualifiers
source 1..3468
/db_xref="H-InvDB:HIT000095573"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39471 IMAGE:5270043"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3468
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
/db_xref="IMGT/GENE-DB:25721"
/db_xref="MIM:25721"
CDS 341..2395
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/codon_start=1
/product="IQCH protein"
/protein_id="AAH39292.1"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
/db_xref="IMGT/GENE-DB:25721"
/db_xref="MIM:25721"
/translation="MKVKTPLRALKSLWDYDFLIYDGVIDNTAPDFLAFKEHFSLAWG
GIFSLLEHVEKFLRNYAIPEVKIKGNNLVALLPEFELTNKLTRYDLLSVLEDPAHVQM
LINLPGQRYKGQDGNSEAAMKIQATWKCYKARKFFLFYRQQKWASGVIAIAWLLYCHK
TRLKKILKESRQRHLENFRIRAKHLAANWNRIRTSRRTIIHIPSLGYSQPVREHIADF
NTQQNMQLGRLCDILDANVNVIYICSHHMNDELVLYYKKILSLHAAVKSGNLEDRSDL
QDRFKIITPEAVNIFPMIEQLSQLITDHLQIQRWLFKMDSEFRGNGTAFCDIPSYLKC
YKWVLKESSRYGLEDWRKKWAQEPALVKISEELAGILAQHAQPVNEKRFPTWRKFLQT
FLSQGGVIEAFPPADNVTNLTVDMLIEPNGKISVLSTGDQLHAESPFISSGTTVPQTS
VDPQVLTYLCLQIGKACRMRDVVGYFSIDLVTFIDPSTLEQQVWATGLNLAYSDQLAL
TQLTLYLTNGHLDCSLSTLEVPRFVPKERKKTKCMSALSMPMLATSRYAVMTTQLRHS
NLSLVFHYVFLQICRAHGIGYDLEERQGTVFILYEHLKRHKLGMLTIGEDLQGVLMTF
ARHLFIIHQEISAPNMQGETNFKTTIADIETILRVTKENKMRFEEEQQSKDDKNLSKP
KK"
BASE COUNT 1088 a 713 c 716 g 951 t
ORIGIN
1 ggttggaaac cgcgcctccg cggaggtagc cgttccctga cctagccatg gcacagaaca
61 ctgaaaacca cgaccctgtc ggatccatct taatccagat ccatgaagac ctttatcagt
121 taaaggagaa attaacaaaa ttctcacctg aggaaaaagg agagactcta gacattcaga
181 gtcttgaaac agcaatcaaa aggactgaag tggggttaag accactttca ctatacctcg
241 ggaaccacct ccatctccag cagaagtgaa gttctttccc aagaaacaaa gatcaaaggg
301 gaaaagcaga aggtcaagag gacatcatga taggaaggcc atgaaagtca aaacaccttt
361 gagagccctg aaatcactgt gggattatga ctttttaatt tatgatggtg tcatagacaa
421 tacagcccca gacttcttag cattcaagga acattttagc ttagcttggg gaggtatttt
481 ttctctcttg gaacacgtcg agaagtttct caggaactat gctataccag aagtcaaaat
541 aaaagggaat aatttggtgg ccctccttcc agagtttgag ctgacgaata aacttaccag
601 atatgacctt ctctcagtgt tagaggaccc agctcatgtc caaatgctga taaatcttcc
661 agggcaaagg tacaagggcc aagatggaaa ttcggaggcc gccatgaaga tccaagccac
721 atggaaatgc tacaaagcaa gaaaattctt cctcttttat cgccagcaga agtgggcatc
781 aggtgtgatt gccattgctt ggctgttata ttgccataag actcgactaa agaagatact
841 aaaggaatca cgtcagagac acctggagaa ttttcgcatt cgagccaagc atctggcagc
901 caactggaat cgcatcagga cctccaggag gactattatc catatcccat cattagggta
961 ttcccagcct gtgagagaac atattgccga tttcaacaca cagcagaaca tgcagctggg
1021 gaggctgtgt gacatcttag atgccaatgt gaatgtcatc tacatctgct cccatcatat
1081 gaatgacgag ttagtgctgt attacaaaaa aatcctgagt ctacatgcag ccgtcaaatc
1141 tgggaacctt gaggacagaa gtgacctgca ggacaggttc aaaattatca cacctgaagc
1201 tgtaaacatc ttccctatga tagagcagct gagtcagctg ataactgatc acctgcaaat
1261 acagcgctgg ctctttaaaa tggactctga gttccgagga aatgggactg cattttgtga
1321 tattccttcc tacctaaagt gctacaaatg ggtgctaaag gagagtagca gatatggcct
1381 tgaagactgg agaaagaaat gggcacaaga gccagctttg gtgaagatct ctgaggagct
1441 ggcgggcatt ttagcacagc acgcacagcc agtcaatgag aaacggttcc cgacgtggag
1501 gaaattcctc caaacatttc tcagtcaagg gggtgtgatc gaagcattcc cacctgcaga
1561 caatgtcacc aacctcacag tggacatgct gatagagccc aacgggaaaa tcagcgtgct
1621 gtcgacaggg gaccagcttc atgctgaaag ccccttcatc tcctctggta ccaccgtgcc
1681 tcagacctca gtggatcccc aagttctcac ttatttgtgc ctccaaattg gaaaagcctg
1741 cagaatgaga gatgtggttg gttacttttc gatagatctg gtgactttta tagatccaag
1801 caccttggaa caacaggtgt gggcaaccgg ccttaacctc gcatatagtg accagctggc
1861 cctgactcaa ctcaccttat acctgacaaa cggccatctg gattgcagtt tgagcaccct
1921 ggaagtgccc cgctttgttc caaaggaaag gaagaaaacc aaatgcatga gtgcgctgtc
1981 aatgccgatg ctggcaacca gtcgctatgc agtgatgacc acccagctaa gacacagcaa
2041 tctctcactg gttttccact atgtttttct ccagatctgt agggcccatg gcattggcta
2101 tgatcttgag gaaaggcaag gaactgtttt tatattatat gagcacctga agagacacaa
2161 gttgggaatg ttaacaatcg gcgaggatct ccagggggtc ctcatgacct ttgctcgcca
2221 tctcttcatc atccatcaag aaatatcagc acctaatatg caaggcgaga ccaattttaa
2281 gaccaccatt gctgatattg aaactattct aagagtaaca aaggaaaaca aaatgagatt
2341 tgaagaggag caacagtcca aagatgataa aaacctctct aaacccaaga aatgatcctg
2401 gaatacagta cataacaatt tggatcccag tctggaataa aaagggcaat ttttttttct
2461 gttagaaata aaagccaggg gaaattggtt tgctttgtgt gctaggaggt gaatcagaac
2521 agattataat gaaatgctct ttttaaaaca ttgtttatta agtgatctta ttttatttat
2581 taaaccaaaa cttatttgtg tttgcatttg agagtgttga acaatccctt cttcttctca
2641 aactcagaaa aaagtaatct gataaaagaa gaaagttaaa agtcttactg atatcacctc
2701 cgcatttact tcctcatagg cctcaggatt atgtagcttt tattttttat gttttataaa
2761 gttttctcct atttctaata gtccatcgat cttctgcatt tataggtttg aataaaggct
2821 taagaattgc tatttgtcaa aacacaaatg cctttttttc aaagcttcaa attatattga
2881 aattatattt atatgaattt ttaagtgact atcattcatc gtgtttttgt tataccaagc
2941 cactattgtc tgctattgtt gccatttttc aaaaagtagg ataagccagc atctagttaa
3001 ccaaagcatc agaatgtatc taggtggcag tatctgctct tagtttaaga tggagtgtag
3061 ctcgagctct gtagcttgaa taaacatttg tattctctag ttctccattt aatacagcag
3121 taggattttt tcaagtttag ttcaacatta tactaccttt aaaaaggcag actgttaaga
3181 ttgtagtagt gctgactcta actttcagca ttcacttcat aattgtccaa aaatatttcc
3241 acatcagtga gctttactga agggtgaaat aaaagcaaat tacaacacca aaaccattat
3301 tgttttaaag aatgaccttt atgtctataa aaatatttta gtgtattggg gaaaggaata
3361 ggatttttac ctgtggaatt tcaataattt gttaactgtg attcagccac aggctaagag
3421 tttctgtaat aaaattaaca tttgtgtgtg tcaaaaaaaa aaaaaaaa
//