LOCUS       BC039269                3760 bp    mRNA    linear   HUM 16-DEC-2006
DEFINITION  Homo sapiens NLR family, pyrin domain containing 2, mRNA (cDNA
            clone MGC:33950 IMAGE:5298283), complete cds.
ACCESSION   BC039269
VERSION     BC039269.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3760)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 48 Row: m Column: 24
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
FEATURES             Location/Qualifiers
     source          1..3760
                     /db_xref="H-InvDB:HIT000052186"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33950 IMAGE:5298283"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3760
                     /gene="NLRP2"
                     /gene_synonym="CLR19.9"
                     /gene_synonym="FLJ20510"
                     /gene_synonym="NBS1"
                     /gene_synonym="PAN1"
                     /gene_synonym="PYPAF2"
                     /db_xref="GeneID:55655"
                     /db_xref="HGNC:HGNC:22948"
                     /db_xref="MIM:609364"
     CDS             112..2652
                     /gene="NLRP2"
                     /gene_synonym="CLR19.9"
                     /gene_synonym="FLJ20510"
                     /gene_synonym="NBS1"
                     /gene_synonym="PAN1"
                     /gene_synonym="PYPAF2"
                     /codon_start=1
                     /product="NLRP2 protein"
                     /protein_id="AAH39269.1"
                     /db_xref="GeneID:55655"
                     /db_xref="HGNC:HGNC:22948"
                     /db_xref="MIM:609364"
                     /translation="MVSSAQMGFNLQALLEQLSQDELSKFKYLITTFSLAHELQKIPH
                     KEVDKADGKQLVEVLTTHCDSYWVEMASLQVFEKMHRMDLSERAKDEVREAALKSFNK
                     RKPLSLGITRKERPPLDVDEMLERFKTEAQAFTETKGNVICLGKEVFKGKKPDKDNRC
                     RYILKTKFREMWKSWPGDSKEVQVMAERYKMLIPFSNPRVLPGPFSYTVVLYGPAGLG
                     KTTLAQKLMLDWAEDNLIHKFKYAFYLSCRELSRLGPCSFAELVFRDWPELQDDIPHI
                     LAQARKILFVIDGFDELGAAPGALIEDICGDWEKKKPVPVLLGSLLNRVMLPKAALLV
                     TTRPRALRDLRILAEEPIYIRVEGFLEEDRRAYFLRHFGDEDQAMRAFELMRSNAALF
                     QLGSAPAVCWIVCTTLKLQMEKGEDPVPTCLTRTGLFLRFLCSRFPQGAQLRGALRTL
                     SLLAAQGLWAQTSVLHREDLERLGVQESDLRLFLDGDILRQDRVSKGCYSFIHLSFQQ
                     FLTALFYTLEKEEEEDRDGHTWDIGDVQKLLSGVERLRNPDLIQAGYYSFGLANEKRA
                     KELEATFGCRMSPDIKQELLRCDISCKGGHSTVTDLQELLGCLYESQEEELVKEVMAQ
                     FKEISLHLNAVDVVPSSFCVKHCRNLQKMSLQVIKENLPENVTASESDAEVERSQDDQ
                     HMLPFWTDLCSIFGSNKDLMGLAINDSFLSASLVRILCEQIASDTCHLQRVVFKNISP
                     ADAHRNLCLALRGHKTVTYLTLQGNDQDDMFPALCEVLRHPECNLRYLGLVSCSATTQ
                     QWADLSLALEVNQSLTCVNLSDNELLDEGAKLLYTTLRHPKCFLQRLS"
BASE COUNT          926 a          942 c         1028 g          864 t
ORIGIN      
        1 tatcacaggg ctgcggccga gaaagaagcc ttattagagc tttctcaacc tgcagccctc
       61 atctccgccg gcgagtaggg ccaggtgttg ggagctccca cgtgggacaa gatggtgtct
      121 tcggcgcaga tgggcttcaa cctgcaggct ctcctggagc agctcagcca ggatgagttg
      181 agcaagttca agtatctgat cacgaccttc tccctggcac acgagctcca gaagatcccc
      241 cacaaggagg tagacaaggc tgatgggaag caactggtag aagtcctcac cacccattgt
      301 gacagctact gggtggagat ggcgagcctt caggtctttg aaaagatgca ccgaatggat
      361 ctgtctgaga gagcaaagga tgaagtcaga gaagcagctt tgaaatcctt taataaaagg
      421 aaacctctat cattagggat aacacggaaa gaacgaccac ctctagacgt ggacgaaatg
      481 ctggagcgct tcaaaacaga agcacaagcg tttacagaaa cgaaaggaaa tgtcatctgc
      541 ctgggtaaag aagtctttaa aggaaaaaag ccagacaaag acaataggtg caggtatata
      601 ttgaagacga agttccggga gatgtggaag agctggcctg gagatagcaa agaggtccag
      661 gttatggctg agagatacaa gatgctgatc ccattcagca accccagggt gcttcccggg
      721 cccttctcat acacggtggt gctgtatggt cctgcaggcc ttgggaaaac cacgctggcc
      781 cagaaactaa tgctagactg ggcagaggac aacctcatcc acaaattcaa atatgcgttc
      841 tacctcagct gcagggagct cagccgcctg ggcccgtgca gttttgcaga gctggtcttc
      901 agggactggc ctgaattgca ggatgacatt ccacacatcc tagcccaagc acggaaaatc
      961 ttgttcgtga ttgacggctt tgatgagctg ggagccgcac ctggggcgct gatcgaggac
     1021 atctgcgggg actgggagaa gaagaagccg gtgcccgtcc tcctggggag tttgctgaac
     1081 agggtgatgt tacccaaggc cgccctgctg gtcaccacgc ggcccagggc cctgagggac
     1141 ctccggatcc tggcggagga gccgatctac ataagggtgg agggcttcct ggaggaggac
     1201 aggagggcct atttcctgag acactttgga gacgaggacc aagccatgcg tgcctttgag
     1261 ctaatgagga gcaacgcggc cctgttccag ctgggctcgg cccccgcggt gtgctggatc
     1321 gtgtgcacga ctctgaagct gcagatggag aagggggagg acccggtccc cacctgcctc
     1381 acccgcacgg ggctgttcct gcgtttcctc tgcagccggt tcccgcaggg cgcacagctg
     1441 cggggcgcgc tgcggacgct gagcctcctg gccgcgcagg gcctgtgggc gcagacgtcc
     1501 gtgcttcacc gagaggatct ggaaaggctc ggggtgcagg agtccgacct ccgtctgttc
     1561 ctggacggag acatcctccg ccaggacaga gtctccaaag gctgctactc cttcatccac
     1621 ctcagcttcc agcagtttct cactgccctg ttctacaccc tggagaagga ggaggaagag
     1681 gatagggacg gccacacctg ggacattggg gacgtacaga agctgctttc cggagtagaa
     1741 agactcagga accccgacct gatccaagca ggctactact cctttggcct cgctaacgag
     1801 aagagagcca aggagttgga ggccactttt ggctgccgga tgtcaccgga catcaaacag
     1861 gaattgctgc gatgcgacat aagttgtaag ggtggacatt caacggtgac agacctgcag
     1921 gagctcctcg gctgtctgta cgagtctcag gaggaggagc tggtgaagga ggtgatggct
     1981 cagttcaaag aaatatccct gcacttaaat gcagtagacg ttgtgccatc ttcattctgc
     2041 gtcaagcact gtcgaaacct gcagaaaatg tcactgcagg taataaagga gaatctcccg
     2101 gagaatgtca ctgcgtctga atcagacgcc gaggttgaga gatcccagga tgatcagcac
     2161 atgcttcctt tctggacgga cctttgttcc atatttggat caaataagga tctgatgggt
     2221 ctagcaatca atgatagctt tctcagtgcc tccctagtaa ggatcctgtg tgaacaaata
     2281 gcctctgaca cctgtcatct ccagagagtg gtgttcaaaa acatttcccc agctgatgct
     2341 catcggaacc tctgcctagc tcttcgaggt cacaagactg taacgtatct gacccttcaa
     2401 ggcaatgacc aggatgatat gtttcccgca ttgtgtgagg tcttgagaca tccagaatgt
     2461 aacctgcgat atctcgggtt ggtgtcttgt tccgctacca ctcagcagtg ggctgatctc
     2521 tccttggccc ttgaagtcaa ccagtccctg acgtgcgtaa acctctccga caatgagctt
     2581 ctggatgagg gtgctaagtt gctgtacaca actttgagac accccaagtg ctttctgcag
     2641 aggttgtcgt aagtctctcc tctcttacag agcagctgtg ctttcgatct ggggccacag
     2701 acgagcaatg gtcatgcctg acttggctgt atggaacctc tcgctgatgt gaacacctgt
     2761 tcccatgttt agatccaggc cgatggcctg tgaattttgt tcttctctca ttcctattcc
     2821 ttcataggat caccagtgca tgatagaagg ttggaaaact gtcaccttac agaagccaat
     2881 tgcaaggacc ttgctgctgt gttggttgtc agccgggagc tgacacacct gtgcttggcc
     2941 aagaacccca ttgggaatac aggggtgaag tttctgtgtg agggcttgag gtaccccgag
     3001 tgtaaactgc agaccttggt gctttggaac tgcgacataa ctagcgatgg ctgctgcgat
     3061 ctcacaaagc ttctccaaga aaaatcaagc ctgttgtgtt tggatctggg gctgaatcgc
     3121 ataggagtta agggaatgaa gttcctgtgt gaggctttga ggaaaccact gtgcaacttg
     3181 agatgtctgt ggttgtgggg atgttccatc cctccgttca gttgtgaaga cctctgctct
     3241 gccctcagct gcaaccagag cctcgtcact ctggacctgg gtcagaatcc cttggggtct
     3301 agtggagtga agatgctgtt tgaaaccttg acatgttcca gtggcaccct ccggacactc
     3361 aggttgaaaa tagatgactt taatgatgaa ctcaataagc tgctggaaga aatagaagaa
     3421 aaaaacccac aactgattat tgatactgag aaacatcatc cctgggcaga aaggccttct
     3481 tctcatgact tcatgatctg aatccccccg agtcattcat tctccatgaa gtcatcgatt
     3541 ttccaggtgt tggtgaactg cctgtgactc ctctcctccc cggcccctac ccctcaggga
     3601 taatgagttc attgctgggc tagatgtttt agccatgatt ctgcctctgt tttatacctg
     3661 cacacatcct tatctttgtt acatatgaaa tatctgtatc acgggtatat tgagagaaat
     3721 aaaggtgaga gcattcacaa aagaaaaaaa aaaaaaaaaa
//