LOCUS BC039268 3545 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens chromosome 11 open reading frame 82, mRNA (cDNA clone
MGC:33936 IMAGE:5296465), complete cds.
ACCESSION BC039268
VERSION BC039268.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3545)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25072198.
FEATURES Location/Qualifiers
source 1..3545
/db_xref="H-InvDB:HIT000052185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33936 IMAGE:5296465"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3545
/gene="C11orf82"
/db_xref="GeneID:220042"
/db_xref="HGNC:HGNC:26351"
CDS 213..3209
/gene="C11orf82"
/codon_start=1
/product="chromosome 11 open reading frame 82"
/protein_id="AAH39268.1"
/db_xref="GeneID:220042"
/db_xref="HGNC:HGNC:26351"
/translation="MNRRRKFLLASVLALQNSSFIYPSCQKCFSRIILVSKRSNCPKC
GSTGESGNANYRYKLSLKVAESNKLFVITVFGSCLDTFFGLTATGLHRYIQDPNKIPE
TLDNDTTQNLLTKAVETCFVGQSFIFGVTNFENQPGQGSDASNFLQQCSDHKRKAKAL
VACQIVLPDPGIAGFTVIDYFHQLLQTFNFRKLQCDSQAPNNHLLALDHSNSDLSSTY
TSDSTSDFFKSCSKDTFSKFWQPSLEFTCIVSQLTDNDDFSASEQSKAFGTLQQNRKS
ISIAEATGSSSCHDPIQDSWSLVSYMDKKSTAEKLGKELGLQAKELSAVHSSHHEIGV
NDSNLFSLEMREPLESSNTKSFHSAVEIKNRSQHELPCFQHHGIDTPTSLQKRSACCP
PSLLRLEETASSSQDGDPQIWDDLPFSESLNKFLAVLESEIAVTQADVSSRKHHVDND
IDKFHADHSSLSVTPQRTTGALHTPPIALRSSQVIVKANCSKDDFLFNCKGNLSPSVE
KESQPDNKVEAVSVNHNGRDMSEYFLPNPYLSALSSSSKDLETIVTLKKTIRISPHRE
SDHSSLNNKYLNGCGEISVSEMNEKLTTLCYRKYNDVSDLCKLENKQYCRWSKNQDDS
FTICRKLTYPLETLCNSPNRSTNTLKEMPWGHINNNVTQSYSIGYEGSYDASADLFDD
IAKEMDIATEITKKSQDILLKWGTSLAESHPSESDFSLRSLSEDFIQPSQKLSLQSLS
DSRHSRTCSPTPHFQSDSEYNFENSQDFVPCSQSTPISGFHQTRIHGINRAFKKPVFY
SDLDGNYEKIRIFPENDKQQASPSCPKNIKTPSQKIRSPIVSGISQPDVFNHYPFAEC
HETDSDEWVPPTTQKIFPSDMLGFQGIGLGKCLAAYHFPDQQELPRKKLKHIRQGTNK
GLIKKKLKNMLAAVVTKKKTHKYNCKSSGWISKCPDIQVLAAPQLHPILGPDSCSEVK
CCLPFSEKGPPSVCETRSAWSPELFS"
BASE COUNT 1147 a 724 c 653 g 1021 t
ORIGIN
1 gggagattcg attggaaggc tgccggcgtg ctactgagtt cggccggtcc gagtcactgt
61 gcgtcgcctg ggcgcgttcc tggtcttctc ccccagggtc ttgctctgtc acccaggctg
121 gagtgccatg gcatcatcat agctcactat ggccttgatc ctcctgcctt agcctcccaa
181 gcagctggta ttacagacca cggtgtgaac acatgaacag aagacgaaaa tttcttctag
241 cctcagtact tgctctccag aattcaagtt ttatatatcc atcatgtcag aagtgcttct
301 ctaggataat cctggtctcc aaaaggtcta attgtccaaa atgtggctct actggtgaat
361 ctggaaatgc caattacaga tacaaacttt ccttaaaagt tgcagaatca aacaaattgt
421 ttgttattac tgtatttgga agttgcttag atacattttt tggtcttact gccactggtt
481 tgcacaggta cattcaggat cctaataaaa ttccagaaac actggacaat gatacaactc
541 agaatctatt aactaaagca gttgaaactt gctttgttgg acaaagcttt atttttggag
601 tgacgaattt tgaaaaccaa cctggacaag gttcagatgc cagtaacttc ttacagcaat
661 gctctgacca caaaagaaaa gccaaagcac tagtggcttg ccagattgtt ctaccagacc
721 caggtattgc aggctttact gtcattgact acttccatca acttttgcag acttttaatt
781 tcaggaaact tcagtgtgac tctcaggcac ctaacaatca cttacttgct ttagatcact
841 caaatagtga tctcagcagc acatatactt ctgacagcac ttctgatttt ttcaagtcct
901 gcagcaagga tactttttca aaattctggc agccatcact tgaattcact tgcattgttt
961 cacaactaac agataatgat gatttttcag cttcagaaca aagtaaggcc tttggtactc
1021 ttcagcagaa cagaaagtcc atctccattg cagaggccac tggttccagt agctgccatg
1081 atcccattca ggattcatgg agccttgttt catatatgga taaaaagagt acagcagaaa
1141 agttgggtaa agaacttggc ttacaagcta aggagctgag tgcagttcac agcagtcatc
1201 atgaaattgg agttaatgac tctaatttat tctctttgga aatgcgagag ccccttgagt
1261 caagtaatac aaaatccttc cacagtgcag tggaaattaa aaataggtcc cagcatgagc
1321 taccatgttt tcagcatcat ggtatagata ccccaactag ccttcagaag agatctgcat
1381 gttgtccacc ttcgttactc agacttgaag agacagccag cagttcccag gatggtgacc
1441 ctcaaatttg ggatgatctg ccattctctg aaagcctgaa caagtttctg gcagttcttg
1501 aaagtgagat tgctgtaacc caggcagatg tcagtagtag gaaacatcat gtagataatg
1561 acattgataa atttcatgca gaccacagca gtttatctgt gactccccag agaactactg
1621 gagccctgca tacaccacct atagctttaa gatcatcaca agtaatagtc aaagcaaact
1681 gtagcaaaga tgacttcctt ttcaactgta aaggaaatct aagtcctagt gttgaaaagg
1741 agtcacaacc agataacaaa gtagaggctg tctctgtaaa tcataatgga agagatatgt
1801 cagaatattt tttaccgaat ccttacctgt cagctctgtc ttcatcttca aaagatttag
1861 aaacaatagt tactcttaag aagactatca gaatctcacc acacagggag agtgaccatt
1921 ctagtctaaa taacaaatat ttgaatggat gtggagaaat atcagtttca gaaatgaatg
1981 aaaagttgac aactctgtgt tataggaagt ataatgatgt ctctgatctt tgcaaattag
2041 aaaataaaca atattgtagg tggtccaaga accaagatga cagttttaca atttgcagga
2101 aacttacata tcctttagaa actctttgca atagtccaaa tagaagtaca aatacattga
2161 aagaaatgcc ttggggacat atcaataaca acgtaacaca gagctattct attggttatg
2221 aaggtagcta tgatgcctct gctgatctct ttgatgatat tgctaaagaa atggacattg
2281 caactgagat taccaaaaaa tcacaggata ttttgttaaa atggggaaca tctttggcag
2341 aaagtcaccc ttcagagtct gatttttcac tgagatcact ttctgaagac ttcatccagc
2401 cttcacaaaa attatccttg caaagcctat ctgactctag gcattcaaga acatgctctc
2461 caacacctca ttttcaatca gattcagaat ataattttga aaatagtcaa gactttgttc
2521 catgttcaca gtcaactcca atttcagggt tccaccaaac aagaattcat gggataaaca
2581 gagctttcaa aaaacctgta ttttattcag atcttgatgg taactatgaa aaaataagga
2641 ttttccctga aaatgacaaa cagcaagcca gcccaagctg tccaaaaaat ataaaaacac
2701 ctagccagaa aatcagaagc cctattgtat ctggtatttc acaaccagac gttttcaatc
2761 actacccttt tgctgagtgc catgaaactg atagtgatga atgggtccct cctaccacac
2821 aaaaaatatt tccttcagat atgcttggat tccaaggcat aggtctaggg aaatgccttg
2881 ctgcctatca tttccctgat caacaagagt taccaagaaa gaaactgaaa catattagac
2941 aaggaaccaa taaaggttta attaagaaga aattaaagaa tatgcttgca gcagttgtta
3001 cgaaaaagaa aactcataaa tataactgta aaagttcagg ctggatttcc aaatgtccag
3061 acattcaagt cttagcagca cctcagctgc accctattct tggacctgat tcttgttcag
3121 aagtcaaatg ttgccttcca ttttcagaaa aaggcccacc ttcagtgtgt gaaactcgaa
3181 gtgcttggtc acctgaattg ttttcataaa aagtcacctg aacccaattc ctgaactttt
3241 aaatctgttt ggaaatgttt gccttcaggg gtacggaaag cattctttac attttgaaca
3301 cttggagaga agcaaattga aaacaggact ctgctgggag ctactgtgcc ttttaaaata
3361 taaagccatt gttttcccca gggttttatc tagaatacta tgattaggta gttgagcact
3421 ttatcttata ctgtttattg tactttaata atattgttaa gattgttttt gaaagtatta
3481 atgtttgtta aaatcacata tacatccaga aataaagact ttgcaaacca aaaaaaaaaa
3541 aaaaa
//