LOCUS BC039260 4718 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens RNA binding motif protein 12B, mRNA (cDNA clone
IMAGE:5288230), containing frame-shift errors.
ACCESSION BC039260
VERSION BC039260.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42794262
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4718
/db_xref="H-InvDB:HIT000052179"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5288230"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1417 a 822 c 1003 g 1476 t
ORIGIN
1 gaggtctacc tgttttgggg aggctgctgc gacgaagagt tccctcagcc tccggccttg
61 tgtgtccgac tcggcagcag tgttaagttg cttttacaga gttaacaggt ctccaagaaa
121 ttttaaaaaa ggtcattatt gctgtggttt gagctcagca tggctgtagt catccgttta
181 ctggggcttc cttttattgc ggggcctgtg gatattcgtc acttcttcac gggattgact
241 attcctgatg gaggagtgca tataattgga ggggaaattg gggaggcttt tattattttt
301 gcaacagatg aagatgcaag acgtgccata agtcgttcag gagggtttat caaggattca
361 tctgtagagc tctttcttag tagcaaggca gaaatgcaga agactataga aatgaaaaga
421 actgatcgtg taggaagagg gcgtccagga tctgggacat caggggttga cagcctgtct
481 aattttattg agtctgttaa ggaagaagca agtaattctg gatatggctc ttcaattaat
541 caagatgctg ggtttcatac taatggtaca ggacatggta atttaaggcc aagaaagaca
601 aggccattga aggccgagaa tccttacttg tttctacgag gtttgcctta cctagtaaat
661 gaagatgatg tacgtgtctt tttctctggt ttgtgcgtgg atggagtaat tttcttaaaa
721 catcatgatg gccgaaataa tggtgatgcc atagtaaaat ttgcttcatg tgttgatgct
781 tcaggaggtc ttaaatgtca tagaagtttt atgggttcaa gatttataga agtaatgcaa
841 ggatcagaac aacagtggat tgagtttggt ggtaatgcag ttaaggaggg tgacgttctt
901 aggagatttg aagaacattc tccaccaaga ggaattaatg atagacattt tcgaaaacgg
961 tctcattcaa aatctcccag aagaacacgt tctcgttccc ctcttggatt ttatgttcac
1021 ttaaaaaatc tgtccctcag tattgacgaa agagatttaa gaaatttctt tagaggtact
1081 gatctgactg atgaacagat taggttttta tataaagatg aaaatagaac aagatatgcc
1141 tttgtgatgt tcaagactct gaaagactat aataccgctc tgagtttaca taagactgtt
1201 ttacaatatc gtccagttca tattgatcca atttctagaa aacaaatgct gaagttcatt
1261 gcacgttatg aaaagaagag atcagggtca ctagagagag ataggcccgg acatgtttca
1321 caaaaatact ctcaagaagg taactctggc cagaaactgt gcatctatat aaggaatttt
1381 ccatttgatg ttacaaaagt tgaagtgcag aagttctttg cagactttct tcttgctgag
1441 gatgacattt acttgcttta tgatgacaaa ggtgttggtc tgggagaagc attagtgaaa
1501 tttaaatcag aagaacaggc catgaaagct gaacgtttaa accgacgaag attcctaggg
1561 acagaggtgt tattaagact tatatctgag gcacaaatac aggagtttgg tgtaaatttt
1621 tctgtgatgt ccagtgaaaa aatgcaagct cgctcacagt cacgtgagcg aggtgaccat
1681 tcccatttat ttgactcaaa agacccacca atatactcag ttggtgcttt tgaaaacttt
1741 agacatcagc tagaggactt gaggcaactg gataacttca agcatcccca gagggatttc
1801 cggcagcctg acaggcaccc tccagaagac ttccgacact cctcagagga ctttaggttc
1861 cccccggagg acttcaggca ctccccagag gacttcaggc gacctaggga ggaagacttc
1921 aggcggcctt ctgaggagga cttcaggcgc ccttgggagg aagatttcag gtgccctccg
1981 gaggatgact tcaggcaccc tagggaggag gactggagga gaccacctcc agagcatttt
2041 ggcggcctcc cccagagcac ttccggcggc cacccccaga gcacttcagg cggccacccc
2101 cagagcattt caggcgcccg cccccggagc acttccggag accgccccag gagcatttca
2161 ggcggccacc tcaggagcat ttcaggcgct cccgagagga agatttcagg cacccaccag
2221 atgaagactt caggggccct cctgatgaag actttaggca ccctcctgat gaggacttca
2281 ggagccccca ggaggaagat tttagatgcc cttctgatga ggacttcagg cagctcccag
2341 aggaagacct tagggaagct ccggaggagg accctagact tcctgacaat tttagacctc
2401 ctggtgagga ttttaggagc ccgcctgatg attttagaag tcaccgccct tttgtgaatt
2461 ttggtcgccc agaaggtggc aagtttgatt ttggaaagca taatatggga agttttcctg
2521 aggggagatt tatgcctgat ccaaaaataa attgtggttc aggtagagta actcctatta
2581 agataatgaa tcttccattt aaagctaatg tgaatgaaat tttagacttt ttccatggtt
2641 acagaatcat acctgattca gtttcgatac agtataatga gcaaggctta cctacagggg
2701 aagccattgt tgctatgata aactataatg aagctatggc tgctattaaa gatctaaatg
2761 ataggccagt tgggccccga aaagttaagt taactttgct gtagagagag agcatttcta
2821 aattcagtta tcttccttac agtattgatg gagtaaaata catttgtttt aaaaaagtgt
2881 ttttttttta aattatctaa tgaaatattt tatttttgac ctgtgaatag aacaaatgta
2941 aatagtagaa tgtgaatctg gttttctttt gcttgcaaat tgccattctt tttttttttc
3001 aaatttaaaa ttacacatgc tgtttttttc tttgatgggg agaaagaact cattccctga
3061 gttcattcat ttttgttgat gtcatcggta atcttcaaga cttattgaag tagagttgta
3121 tttggggaag atacatttta tattcacttt tttttttctt tctgtagtct acctctttta
3181 ctcaaactgt ataaggaaat agtgactgat tgttcaggtt tggcattttc attgctacct
3241 gcctgcagaa ttaatgccct cttccttgtc taagatatta ctgtgttaag tgtcctgtta
3301 attataaata gttcaaaatg gacagactgt caacttgaaa tttacttatg taaaaagctt
3361 aggtgattct tagggtttcc atgttcataa ctttacaaag ctttataaaa ataaaattgc
3421 aacttaatag agctaattaa cttgtatttg tataaaaaga aaaaagaatt gcagcttgat
3481 attgtgaagt ttttcaataa cttcattaaa ccatatttat gatgggaggg accagacatt
3541 ctatagtaat aatgtatagt gctgtgtata attccatggt ttcttcaaca tcttgtcaac
3601 caagtaaaat ttaatacaag atacgcaaaa gatagtaaaa taagaatcta attataggtg
3661 caaggggact caggcttatg ctggaagaat ctgacaagtg gtatagtttg tttttctagg
3721 aagaatttac tgatgagtca cataacttgc atgtaatatt aggttctcat tttttagctt
3781 cgaaactgtg tccatgcaaa gactctataa ctgttaagac ttgtgtggtt gaattttgac
3841 ttctttgata ttcagcattt agtgcataca ttttgcaact agggaatttg attttctata
3901 cccacaataa tatttatggc taacatttat taggcactta ctatgtgcta ggcactgtaa
3961 gcactttaca tgcataatct cggtattccc tgtgagtaca gggttaatta tttacctcta
4021 tttcacaaat gagataatga agtgggatga agtgcgaggt taagcaactt gcttgaagtc
4081 ataggtagta aatcgtgggg ccaattttaa cccagacaga ccactgactc cagttcatgc
4141 ttttgctgcc tcactttttt aagtggtatt tttaattagg aagaccatgc taaagatact
4201 ttcaaggata aatattttct cacttcaatt gttggtttaa aattagcata aataggtaaa
4261 accagcatgc tcaaacactg agctcaaaca ttaacattac taataaaaaa aaaaaagagt
4321 gactttaaaa gtttctttct atccagggtt tctcttggga tactcatatg gtatattact
4381 ggcttatatt tcaaaattat tttattcaac atgattgact ttggcctttt ataatttaca
4441 taaaacataa ttttcctcag ttctgtaatc cagattttcc ccattgagta aataatacaa
4501 ttaaatttac atatggtaat ttagacattt aataggatat tgcataggta gaatactttg
4561 tcagtactta gttactacct atatgtattt ttgtgttact tttcagtgat ttaaagaaat
4621 ctaacagaaa tctgcttaaa tttgttttaa atagtgaata tcctgcttgc tatggaatga
4681 ataaacaggt aaatttgata tgaaaaaaaa aaaaaaaa
//