LOCUS BC039257 4367 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens nucleoporin 155kDa, mRNA (cDNA clone MGC:33787
IMAGE:5295664), complete cds.
ACCESSION BC039257
VERSION BC039257.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4367)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4367)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430148.
FEATURES Location/Qualifiers
source 1..4367
/db_xref="H-InvDB:HIT000052176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33787 IMAGE:5295664"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4367
/gene="NUP155"
/gene_synonym="KIAA0791"
/gene_synonym="N155"
/db_xref="GeneID:9631"
/db_xref="HGNC:HGNC:8063"
/db_xref="MIM:606694"
CDS 117..4292
/gene="NUP155"
/gene_synonym="KIAA0791"
/gene_synonym="N155"
/codon_start=1
/product="nucleoporin 155kDa"
/protein_id="AAH39257.1"
/db_xref="GeneID:9631"
/db_xref="HGNC:HGNC:8063"
/db_xref="MIM:606694"
/translation="MPSSLLGAAMPASTSAAALQEALENAGRLIDRQLQEDRMYPDLS
ELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQC
NCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPH
VRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTI
TSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSED
DPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTI
DRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRL
PPGFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQM
TAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGS
LMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVS
AWATRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPS
HGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASL
VVERIFKSGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAK
VQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLL
CEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGIS
LHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLS
NVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSY
KCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRS
KDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKN
RSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEE
KMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLAECKLA
IIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFF
PLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKKP
LHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITG
NFKSLQAKLERLH"
BASE COUNT 1237 a 903 c 946 g 1281 t
ORIGIN
1 ggcgctcgtt tggcgcgcgc gccctaggcg gcggatctaa gctaacttct tggatctttt
61 cttgtttctc cttggttttt gactttttct ggaccctggt gtctacgatt tccgagatgc
121 cgtcttcttt gttgggcgcg gcgatgccgg cctctacatc tgccgcagcc ctgcaggaag
181 ctctggaaaa tgctggacgg ctcatcgacc gtcagttgca agaggaccgc atgtacccgg
241 acctttccga gctgcttatg gtgtctgccc caaataatcc caccgtttct ggcatgtcag
301 atatggatta tcctttacaa ggacctggtt tgctgtccgt acccaacctt ccagagatca
361 gttccatccg aagagttcct ctcccacctg aacttgttga gcagtttgga catatgcagt
421 gtaattgcat gatgggtgtg ttccctccta tcagcagagc ttggctcaca attgacagtg
481 atatattcat gtggaactat gaggatggag gagaccttgc ctattttgat ggacttagtg
541 agactattct tgctgtgggg cttgtgaagc caaaagcagg catctttcaa cctcatgtgc
601 gacacctcct ggttttggcg acccctgtag acatagtaat tcttggactc agctatgcta
661 atttgcaaac aggttctgga gttcttaatg atagtttgtc tggtggaatg cagttgcttc
721 cagatccttt atattctctt cctactgata atacttacct tttaacaata acttccactg
781 ataatggcag aattttcttg gctggaaagg atggctgttt atatgaagta gcctaccagg
841 ctgaagcagg gtggtttagc caaagatgta ggaaaataaa ccactcaaag agctcacttt
901 ctttccttgt tccttccttg ctacaattca cgttctcaga agatgatcct attcttcaaa
961 ttgcaattga taattctaga aatattttat atacacgatc tgagaaagga gtaatacagg
1021 tgtatgattt gggacaagat ggacaaggaa tgagcagagt tgcctctgtg tcacagaatg
1081 ccattgtctc tgctgctggt aacattgcta ggaccatcga tcgttctgtt tttaaaccaa
1141 ttgtccaaat agcagtgatt gaaaattctg aatcactgga ctgtcagtta ttggctgtca
1201 cacatgcagg tgttaggtta tattttagca cttgtccatt cagacagcca ttagcacggc
1261 ctaatacact gacgctggtt catgtccgct tacctcctgg attctcagca tcttcaaccg
1321 tggaaaagcc ttcaaaagta catagagctc tttatagtaa aggtattcta ttgatggcag
1381 cctcagaaaa tgaggataat gatattttat ggtgtgtcaa ccatgatact tttcctttcc
1441 aaaagccaat gatggaaacc cagatgacag ctggtgttga tggtcattcc tgggctcttt
1501 ctgcgataga tgaattgaaa gtagataaaa taattacacc tttaaacaag gatcatattc
1561 caataactga ttcaccagtt gttgtacagc agcacatgtt acctccgaag aaatttgttc
1621 tcctctcagc acaggggagc cttatgtttc ataaacttag acctgtagat caactgaggc
1681 atctacttgt gagtaatgtg ggaggagatg gagaagagat tgaaagattc tttaaattac
1741 atcaggaaga ccaggcttgt gcaacttgcc ttattcttgc ttgctccact gctgcctgtg
1801 atagagaagt atctgcctgg gctactcggg ctttctttag gtatggtggt gaagcacaga
1861 tgagatttcc aaccactctt ccgcctccaa gtaatgttgg tcccatcttg gggtctcctg
1921 tctattctag ttctcctgtt cctagtggta gtccctatcc aaatccatcc tttttgggaa
1981 caccgtctca tggtatacag cctcctgcca tgtcaactcc agtgtgtgct ctgggaaacc
2041 cagcaactca ggccacaaat atgagttgtg tgactggacc agagattgtg tactctggaa
2101 aacacaatgg tatttgcatt tacttttctc ggatcatggg aaacatttgg gatgcaagct
2161 tagttgtgga gagaatattc aagagtggca acagagagat cactgcaatt gaaagtagtg
2221 ttccctgcca actgctagag tcagtgctac aagaactaaa gggtttgcag gaatttctag
2281 acagaaactc ccagtttgca ggaggaccat taggaaatcc aaatactact gctaaagtgc
2341 agcagaggct gataggattc atgcgtcctg aaaacggaaa tccccagcaa atgcaacagg
2401 aactgcagag gaagtttcat gaggctcaac taagtgaaaa gatttcactt caggcaattc
2461 agcagttggt tcgaaaatca tatcaggctc tggctttatg gaaacttctt tgtgaacatc
2521 aattcactat cattgtggca gaacttcaga aggaacttca agagcagctg aagatcacca
2581 cctttaaaga tcttgtaatc agggacaaag aactcacagg ggcattaatt gcttctctta
2641 tcaactgcta catcagagat aatgccgctg ttgatggcat tagtttacat ttacaggata
2701 tctgcccact tctatatagc actgatgatg caatttgttc taaggcaaat gagcttctcc
2761 agcgttcccg acaagttcaa aataagactg aaaaagaaag aatgttaagg gaatcattaa
2821 aggaatatca aaaaattagc aatcaagtgg acctttccaa tgtttgtgct cagtatagac
2881 aagtgagatt ttatgagggt gtggtggaac tttctcttac ggctgcagag aaaaaagatc
2941 ctcaaggtct tgggcttcat ttctataaac atggagaacc agaagaagac atagttggac
3001 ttcaggcctt ccaagaaaga ttaaacagtt acaaatgcat tacagacaca cttcaagaac
3061 tggtaaatca aagtaaggcc gctcctcagt ctcccagtgt acccaaaaaa cctggtcctc
3121 cagtgttgtc atctgatcca aatatgctga gtaatgaaga agcaggacat cattttgaac
3181 aaatgcttaa attgtcacag cgatccaagg atgagctctt tagtattgcc ctttataatt
3241 ggctaataca agtcgacctt gcagataagc tgctacaggt tgcttctcca tttctggagc
3301 cacatctagt ccgaatggcc aaagttgatc aaaacagagt tcgttatatg gatttactct
3361 ggcggtatta cgagaagaac agaagtttca gtaatgctgc tcgtgtactg tccagactgg
3421 ctgacatgca tagcacagaa atttcacttc agcagcgact agagtacatt gctcgagcca
3481 ttcttagtgc caaaagttcc actgccattt catcaatagc tgccgatggt gaatttcttc
3541 atgaattaga agaaaaaatg gaggttgcta ggatccaact tcagatacag gagacactac
3601 aaaggcagta ttcccatcat tcttctgtac aggatgcagt ttctcagctg gattctgagc
3661 tgatggacat aactaagctt tatggggaat ttgctgaccc atttaaactt gcagagtgca
3721 aacttgcaat aattcattgt gccggttatt cagaccctat attggtgcag acactttggc
3781 aagatatcat agagaaagaa ttgagtgaca gtgtgacatt gagctcctcg gatagaatgc
3841 atgctcttag tctcaagatt gttctccttg gcaaaattta tgctggcaca ccacgcttct
3901 ttcctttaga ttttattgta cagtttttag aacagcaggt ttgtactttg aactgggatg
3961 tgggcttcgt aatacagaca atgaatgaaa ttggagtacc attacctaga ctactagaag
4021 tttatgatca gttgttcaaa tcacgggatc cattctggaa cagaatgaag aagccactgc
4081 accttttgga ttgtatacat gtattattga taagatatgt tgagaatccc agccaagttt
4141 taaattgtga aaggagaaga tttacaaatc tctgcctgga tgctgtttgt ggttaccttg
4201 ttgagctcca gtctatgagc tcgtcagtag cagtacaagc catcactggg aattttaaat
4261 ctcttcaagc taaattagaa cggcttcatt aattactgtg atatactttc atccgtttta
4321 tgatctgtaa aataaaaact cagctgggtc caaaaaaaaa aaaaaaa
//