LOCUS BC039244 3002 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens nuclear transcription factor Y, alpha, mRNA (cDNA clone MGC:32974 IMAGE:5270842), complete cds. ACCESSION BC039244 VERSION BC039244.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3002) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3002) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: a Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31083227. FEATURES Location/Qualifiers source 1..3002 /db_xref="H-InvDB:HIT000052168" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32974 IMAGE:5270842" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3002 /gene="NFYA" /gene_synonym="CBF-A" /gene_synonym="CBF-B" /gene_synonym="HAP2" /gene_synonym="NF-YA" /db_xref="GeneID:4800" /db_xref="MIM:189903" CDS 432..1388 /gene="NFYA" /gene_synonym="CBF-A" /gene_synonym="CBF-B" /gene_synonym="HAP2" /gene_synonym="NF-YA" /codon_start=1 /product="NFYA protein" /protein_id="AAH39244.1" /db_xref="GeneID:4800" /db_xref="MIM:189903" /translation="MEQYTANSNSSTEQIVVQAGQIQQQVQGQPLMVQVSGGQLITST GQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQ IIIQQPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSG MITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVP AIQRIPLPGAEMLEEEPLYVNAKQYNRILKRRQARAKLEAEGKIPKERRKYLHESRHR HAMARKRGEGGRFFSPKEKDSPHMQDPNQADEEAMTQIIRVS" BASE COUNT 829 a 745 c 750 g 678 t ORIGIN 1 gccggcggcc ccggcccggg gcctgcgagc gcctcggggc actcccggcc gaggcctgca 61 ggggccgccc cgcgcgggga tggcgcctcg gggagcaggc acctcggggc tccgaccctc 121 gcagggtgcc agggccagtt gggaatgcgt ccctgttccc cgactcaggc ccaggttctc 181 aggccccagg cctggggcca cgaatggccc tacactaggg gacacatgcg cgccctgggc 241 ctcggcgatt tcctcctggt cgttctggcc gcaaacttaa acctgccctt gcactctcca 301 ctctccggcc cttgggacag gaagcctccc cggggcccgc gccccccgct ccccgctccc 361 agcgagccgg gagtgtacct cacagccttc taggatctcc agagtggaca ggaatctcac 421 ttggagggac catggagcag tatacagcaa acagcaatag ttcgacagag cagattgttg 481 tccaggcagg acagattcag cagcaggtcc aagggcagcc attaatggtg caggtcagtg 541 gaggccagct aatcacatca actggccaac ccatcatggt ccaggctgtc cctggtgggc 601 aaggtcaaac catcatgcaa gtacctgttt ctggaacaca gggtttgcag caaatacagt 661 tggtcccacc tggacagatc cagatccagg gtggacaggc tgtgcaggtg cagggccagc 721 agggccagac ccagcagatc atcatccagc agccccagac ggctgtcact gctggccaga 781 ctcagacaca gcagcagatt gctgtccagg gacagcaagt ggcacagact gctgaagggc 841 agaccatcgt ctatcaacca gttaatgcag atggcaccat tctccagcaa gttacagtcc 901 ctgtttcagg catgatcact atcccagcag ccagtttggc aggagcacag attgttcaaa 961 caggagccaa taccaacaca accagcagtg ggcaagggac tgtcactgtg acactaccag 1021 tggcaggcaa tgtggtcaat tcaggaggga tggtcatgat ggttcctggg gctggctctg 1081 tgcctgctat ccaaagaatc cctctacctg gagcagagat gcttgaagaa gagcctctct 1141 acgtgaatgc caaacaatac aaccgtattc ttaagaggag gcaagcccga gctaaactag 1201 aggcagaagg gaaaattcca aaggagagaa ggaaatacct gcatgagtct cggcaccgtc 1261 atgccatggc acggaagcgt ggtgaaggtg gacgattttt ctctccaaag gaaaaggata 1321 gtccccatat gcaggatcca aaccaagccg atgaagaagc aatgacacag atcatccgag 1381 tgtcctaacc ccacgccatg tgatggagct gatcaaggtc atgtttctca ctgttccagg 1441 aaattgatca actcttccaa tgggacattg atgatcacat tctgcccttt actacaggac 1501 agaaaccact tagtttttaa taagtggctc agtattacaa ttgcagcgat gcctggcaaa 1561 ttgaagttgc aagcctttgt cttactcttt cagtcaggac ctatttcaga ctgttgatga 1621 cattgacatt tcatggattc ggatgatgca aggagacaca tgccacccca gcagtacaca 1681 aagcacttac cttgactggt gaagtcagcc agccatctca gcagggaaga acaaccttct 1741 caaccaaaac tgcaatcagg aaagcagcag cccactcctt cccatggaat ctagacagca 1801 tttatccctc tggtggggga atctcacact gactaactga atggacgctt tgtattcaga 1861 gatggcttcc aggcaaggaa gttctatctt gtgatacgga aacaataaat tcctgagata 1921 cattcttcca atctgtggta ataataagaa ttcctctctg cccagatggt aggttgatat 1981 ttctggactc tagccaagaa aaagctaatt ctggggatag aatgataaaa gactcaagca 2041 ctaaaaatat acattgccga atctcttttt ctagctttga aaagttgtgg cctgcttgtc 2101 cctctgttga ctggtcatct ggaccatcgt acttgctgtg gctacttcta agacaatgta 2161 gagggttatt aaaccttgaa actgcctttc ctaagtagag aacaagacta ttcaacaact 2221 tctttgctga agcactgagg agatttgtaa tactcctaaa ggaagggcca aactagagat 2281 tttcaatcat agactttgtg acagcatttg gggaactaaa agattcatgt gtttcagcct 2341 agtgggagag agtgggggag aggaagagag agagagagca tgtatacccg tatgttatca 2401 tagagcacga ttctccagtg gatggatacc tggaatggat cattaagatg aagagagtaa 2461 ttcacattta ctctagaacc tttaacaagc actgaaagga agaagcctga gatttgatcc 2521 ttgacaattt ctggaaagca ctggtcagtc acactgtcct ggacagagtc caagttaccc 2581 actaaagctt gaggtggatg ttggcttcac tcctgcagca caatgctggc cctagaaagc 2641 gagcattttc attcttccca tggcagctga ttctttggtg ccagttttca tgttttctcc 2701 ataggccttg tgcagaaagg ttttctcatt gcatccatac tgtgagaata aactgcagac 2761 tgaaagaaac atgcctgcag ggtcaggaac tgggccactg ttcccagaac gggttgtgcc 2821 tcagaaatct atttctcttt tagatgttga accctgagag aactaagatg atatttcaga 2881 agagttggct gccttctctg gaaacaagga aaacccaata attccgagga acattggggg 2941 ttaaatacca agaataaaaa ttggttcttc tttgaaaaaa aaaaagaaaa aaaaaaaaaa 3001 aa //