LOCUS BC039130 1630 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone IMAGE:4153922), with apparent retained intron. ACCESSION BC039130 VERSION BC039130.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1630) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1630) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: b Column: 10 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1630 /db_xref="H-InvDB:HIT000095534" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4153922" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 428 a 396 c 432 g 374 t ORIGIN 1 gcctgaggtc accgctgtcc atctgcaggg cttgggaggg tgagctggat acacagcagt 61 gcagactggc ttgacatcca gcccaggcat cccttttcct gtgctctccc ctccaggcag 121 gccagagatg gtggaggttc ctctaggcca gagtggctat gggagttggt ccagtttata 181 ggagcattca acttgcaaca ttccatctcc cgggggtctg tgagagcccc tacatgtcca 241 tctgtcctgc ctcctcacca gaccatgagg aagcaggcct ggaaagggga aaccaattgc 301 tcagggacat tgtcacccgc accagaaatc cagtgatccc aacttcccat tcaaccctgc 361 ttcacaaacc ccaagcagga aaggacttca catgtaactg ttggaatgtt taaattttag 421 acttcagaac ccgtggaggg aggttagaat tacagggttc tgctgggagg tggggtgaga 481 agtttccgtt tgcccacaag agtgtgtgtt ggtggggctt tgtggaagga acagctttct 541 ataaggtggt ctggccactg aagcgtgtcg ggaatgtcgg ggggcccggg gttacagctg 601 cagcagaaat cctctcccac gcctcggctc ttctctgttg cacagaatgt tttctgcagc 661 ctttcagacc taaagttcta gggttctggc acgtgtgttg ggagggggtg gggggttgct 721 ttgttttaac ccctgccctt ctcccacccc tcagcaaaag acgatgccac attgtcagga 781 aaacgaatgc agtcactctc cctgaataag taactgcgac ccgtgggagg agatgccggg 841 gacctgggcc gcgctgccag gacctctgct gtgtctcgcc caccctgtgc cctggcgccg 901 ctgcaacagc ccctcatggc caggagcccc ccatggcctg gggcctcctc ttcatcttgg 961 cacagaaatt gtttggggga tggggggggg gactggggga ggggtagctg ctatctttga 1021 gacagaaaga tgcaggacag catttcatat gtaaccattt gaatgttttt gctgttttta 1081 gaattcagag cccttgctgg ggggtgcctg ggagatgggg taagaagagc tttcatttgt 1141 ctggtagata gatagcatgt aagggggtgg ttgtcccagg aggcagctgc tgacaggttt 1201 gctacacaca gccccggact gtgttgcctg ggtgctcatt cagagagggg ctatcatctg 1261 ggagcctgtg cccctgggtc ctcgagggtc atggcttgtc cctggtcagt cctgtctgac 1321 tgacctcagg gcctcacctc tctgcccttc cctgcccggt tcctactcac ctggctaggg 1381 ccagtgccca ttttcagccc tacccattga tcatttcaag aaacctctgt ttactgtgtg 1441 gcacccaggc aaaacatgct ccacaaattc aacttgtata tttggcagat taaacttgac 1501 attatcgtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1621 aaaaaaaaaa //