LOCUS BC039109 1673 bp mRNA linear HUM 09-SEP-2005 DEFINITION Homo sapiens chromosome 1 open reading frame 177, mRNA (cDNA clone MGC:42925 IMAGE:4837126), complete cds. ACCESSION BC039109 VERSION BC039109.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1673) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1673) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 72 Row: k Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749242. FEATURES Location/Qualifiers source 1..1673 /db_xref="H-InvDB:HIT000095518" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42925 IMAGE:4837126" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1673 /gene="C1orf177" /gene_synonym="FLJ40201" /db_xref="GeneID:163747" CDS 16..1272 /gene="C1orf177" /gene_synonym="FLJ40201" /codon_start=1 /product="C1orf177 protein" /protein_id="AAH39109.1" /db_xref="GeneID:163747" /translation="MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPN WKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLT QLPHFQYQAIMKEKRLKEQRLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTG NYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFK SDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHN KKHGVFSKLPRNPKTPTERIYWANLSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLT SKGSGAKACQMIMGSWNPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDM LMQERITPFTKGKCPPTVDYNSDPTP" BASE COUNT 452 a 447 c 460 g 314 t ORIGIN 1 gcgggcaggc ctgccatgag ggaaagccag gatgccgccg gagctcatgg ctggaaccgc 61 gtcggctcca cggccaccaa gtggttcacc ggggcgccct tcggggtgca gagccacagg 121 tttgacatct ctgctgttta tcccaactgg aagaagttca gcaccttcac tgaggcccca 181 tactccacgc gttattctac ccaagtgtcc cacataggcc ctgggactta cagctccaaa 241 gagacctgct tcagcaagaa gaagctgatg aaggaggtgg acacaggctg ggccaaggcc 301 caggaagcca cgcggctgac ccagctaccc cacttccagt accaggccat catgaaagag 361 aagcggctga aggagcaaag gctgggcccc ggctcctaca acctcaaaga cttcttagaa 421 cagctgcggg agaaaccatg tagcacccgg gggctgctca gctctgggga ggttcgcttc 481 cgaggactca ctgggaacta ctatccaggc cctggaaatt atggggagaa gggtaaccca 541 tacaccaagc tggaggagaa tgcctggaac cggtctcatt ccgagggcct catgtgcagg 601 atgagcaaca agccacaccc ccggcctcat caggggagtg gtctgggacc cggcacctac 661 ttcttcaaaa gcgaccttga gacatatgtg gcacgatccg tcggcacccg cggcccctat 721 gacactttct ctggtgatcg gagcaagcca ctgccttatg ggcactactc catgcagaaa 781 aaaaagccca gggaactgat gaatttcaag agctttgtag aagaacttaa ctcacatcac 841 aataagaagc atggggtttt ttctaaactt ccccgaaacc cgaaaacccc tacagagagg 901 atttactggg ccaacctcag ccagtgcccc cgcacactgg ccacatctgg ccccagtttc 961 tggcttccac aagagaagaa atgcaaaccc gtcaaccagc ccccattcct gttgacctcc 1021 aaggggtcag gtgcaaaggc ctgccagatg attatgggaa gctggaaccc agtaggtgtg 1081 ggccgctacc tcaacacctg gctgatggag acaaaggaca ggcggcagcg atatcgatcc 1141 ctattcctga gtggatccaa acgctacctc tcagacctgg cccgggacat gctcatgcag 1201 gaaaggatca caccatttac taaggggaag tgccctccaa ctgtggatta caattcagat 1261 cctactcctt aaagccacat gcgaaggaca gcctgcagtg accagagagc ccaaaggcct 1321 gaagacaaat ctgggggtga cagcatgggc atgggagtgg ggtgttttag agaaaggaca 1381 catgggcttg ggagagggga gagatgtatg gggatcacat ttgccagagc tgcatacctg 1441 aaggtcacag tgtcttccgg gacagctggg gacaggtatc ttttgttgca ggagatcaat 1501 tatcctgaga actcaactca gccagtgaca tgaacatggg ggccagagag cagatggact 1561 gaagggatgg gacgtagttg acacttgtgg gaccctttct attctaaagc cagagtgctt 1621 ggctccttgt ttattaaagt tcagaaagtg gaaaaaaaaa aaaaaaaaaa aaa //