LOCUS BC039086 1717 bp mRNA linear HTC 24-FEB-2004
DEFINITION Homo sapiens transglutaminase 5, mRNA (cDNA clone IMAGE:5166216),
with apparent retained intron.
ACCESSION BC039086
VERSION BC039086.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1717)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: m Column: 16
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1717
/db_xref="H-InvDB:HIT000095498"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5166216"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 494 a 438 c 393 g 392 t
ORIGIN
1 ggagactctt ttctgggagg caaagagagg tccacaagag gaagacctgt cactaattaa
61 ttactttttt gagacaaggt ctggctttgc tgcccaggct ggagcacagt ggtatgatca
121 aggtcaagcc ttgatctccc aggctcaagt gatcctccac ctcagcctcc caagtaggtg
181 ggactatagg catgtgccat gatgcctagt taattttttt tttttttgag acgagatctt
241 ccttttttgc ccaggttaat cttgaactcc tgagctcaag caatcctctc acctcagact
301 cccaaagtac taagattact ggcatgagcc atcgtgcctg gctatccaca gaggttttaa
361 gccctgtgtg tgctaagtct gtctttctat ccaacagttc atttgctcat ccctcccttg
421 ccttgttcta gaaagaccaa gcagtacaac gtctcccttg gctctgtttg acacaggaac
481 ttccatgtct ggaatgagtg ctggatggcc cggaaggatc tgccccctgc atatggaggc
541 tggcaggtgc tggacgccac acctcaggag atgagcaacg gcgtctactg ctgtggccct
601 gcctctgtca gagccatcaa agaaggagaa gtggacctga actatgacac gccctttgtg
661 ttttcgatgg tgaatgctga ctgcatgtcc tggctcgtcc agggagggaa ggagcagaag
721 cttcaccagg acacgagttc tgttggcaat tttatcagca caaagagcat ccagagtgac
781 gagcgggatg acatcacaga gaactacaag tatgaagaag gatccctcca ggagaggcag
841 gtgtttctga aggctctgca gaagctgaag gctagaagct tccatggctc ccaaagagga
901 gcagagttgc aaccttccag gcccacatca ctgagccagg acagccctcg gagcctgcat
961 acaccttccc ttcgacccag tgatgtggtg caagtctccc tgaaattcaa gctgctcgac
1021 ccgcccaaca tgggccagga tatatgcttt gtcctgctgg ccctcaacat gtcctcccag
1081 ttcaaggacc tcaaagtgaa cctgagtgcc cagtctctgc tgcacgatgg cagccccctg
1141 tccccattct ggcaggacac agcgttcatc acactctctc ctaaagaagc aaagacctac
1201 ccctgcaaaa tctcctattc ccagtacagc cagtacctgt caacagacaa gctgatccgc
1261 atcagtgccc tgggtgaaga gaaaagcagt cctgagaaaa tcctggtgaa caagatcatc
1321 accttatctt atccaagcat cacgattaat gttctaggag cagccgttgt gaaccagcca
1381 ctctccatac aggtgatatt ttcaaacccc ctctcggagc aggttgagga ctgtgtgctg
1441 actgtggaag gaagtggcct cttcaagaaa cagcagaaag tcttccttgg agtcctcaaa
1501 ccccaacacc aagcaagcat cattctggag accgtcccct tcaagagtgg acaaaggcag
1561 atccaagcta atatgagaag caacaagttt aaggacatta agggttacag gaatgtttat
1621 gtagactttg cattataaat tctggaacaa cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//