LOCUS BC039085 4106 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 11, mRNA (cDNA clone IMAGE:3850196), with apparent retained intron. ACCESSION BC039085 VERSION BC039085.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4106) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4106) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 52 Row: a Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21729872 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..4106 /db_xref="H-InvDB:HIT000052139" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3850196" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 999 a 1076 c 914 g 1117 t ORIGIN 1 gcggggtcag gcgtgttggg gatgacgccc aggatggtgc tttgcagcga cgtgcccttc 61 agaaggcggc tccgcaccag ctgcaggttg cgggccgagt ccacgctggt gcgcatggtg 121 gagccgggca gcaggacgcc ctcgtgggtg agcagcagcg ggaggcgact ggggatctgg 181 atggggctca ctgatgacat gctggcagcc tttcgcactg ggggctgtca aaaagagcca 241 gacagacagc tgcccccggc ctgccccgca gtcaccaaac ctcagacccg cctccacgcc 301 tccgcttccg gctacgcgct acggtccgtc cccgggccca aaagccatgg cttcgcgctg 361 ctctctagga gagcctcccg aattggcagg aactgaaaat gactaggaag aggacatact 421 gggtgcccaa ctcttctggt ggcctcgtga atcgtggcat cgacataggc gatgacatgg 481 tttcaggact tatttataaa acctatactc tccaagatgg cccctggagt cagcaagaga 541 gaaatcctga ggctccaggg agggcagctg tcccaccgtg ggggaagtat gatgctgcct 601 tgagaaccat gattcccttc cgtcccaagc cgaggtttcc tgccccccag cccctggaca 661 atgctggcct gttctcctac ctcaccgtgt catggctcac cccgctcatg atccaaagct 721 tacggagtcg cttagatgag aacaccatcc ctccactgtc agtccatgat gcctcagaca 781 aaaatgtcca aaggcttcac cgcctttggg aagaagaagt ctcaaggcga gggattgaaa 841 aagcttcagt gcttctggtg atgctgaggt tccagagaac aaggttgatt ttcgatgcac 901 ttctgggcat ctgcttctgc attgccagtg tactcgggcc aatattgatt ataccaaaga 961 tcctggaata ttcagaagag cagttgggga atgttgtcca tggagtggga ctctgctttg 1021 ccctttttct ctccgaatgt gtgaagtctc tgagtttctc ctccagttgg atcatcaacc 1081 aacgcacagc catcaggttc cgagcagctg tttcctcctt tgcctttgag aagctcatcc 1141 aatttaagtc tgtaatacac atcacctcag gagaggccat cagcttcttc accggtgatg 1201 taaactacct gtttgaaggg gtgtgctatg gacccctagt actgatcacc tgcgcatcgc 1261 tggtcatctg cagcatttct tcctacttca ttattggata cactgcattt attgccatct 1321 tatgctatct cctggttttc ccactggcgg tattcatgac aagaatggct gtgaaggctc 1381 agcatcacac atctgaggtc agcgaccagc gcatccgtgt gaccagtgaa gttctcactt 1441 gcattaagct gattaaaatg tacacatggg agaaaccatt tgcaaaaatc attgaagacc 1501 taagaaggaa ggaaaggaaa ctattggaga agtgcgggct tgtccagagc ctgacaagta 1561 taaccttgtt catcatcccc acagtggcca cagcggtctg ggttctcatc cacacatcct 1621 taaagctgaa actcacagcg tcaatggcct tcagcatgct ggcctccttg aatctccttc 1681 ggctgtcagt gttctttgtg cctattgcag tcaaaggtct cacgaattcc aagtctgcag 1741 tgatgaggtt caagaagttt ttcctccagg agagccctgt tttctatgtc cagacattac 1801 aagaccccag caaagctctg gtctttgagg aggccacctt gtcatggcaa cagacctgtc 1861 ccgggatcgt caatggggca ctggagctgg agaggaacgg gcatgcttct gaggggatga 1921 ccaggcctag agatgccctc gggccagagg aagaagggaa cagcctgggc ccagagttgc 1981 acaagatcaa cctggtggtg tccaaggtag ccttgttcag gccacgcagg caggccagct 2041 gccaggctct caggacctga ggctaggagc ttggccaggt gccccaccat ttccttggtt 2101 aaaaactgcc ctctccaaga tctctcccct taaaattcaa atttttcatg gagggcaaac 2161 acaggatatc gttcattttt taatgtgaat taatctatca tttaaaattt ttttggctta 2221 ggtaagaccc aaaataatat gagagtactg tgtgcttgtc cttggaagaa ctaaggacac 2281 agaaaggaga agggaaagga gacccagcta acatttatta cattcctcgt atgtgccaag 2341 cactatcctg tgtttgaatt tggttattct gtgaactcac cttatctggt tctttctctg 2401 cctaatgttt acaaaaatta gcttcctgct gtctcctctt cgcccctcct cttttcttct 2461 ctgttatcta ttaatgtaga tattgatacc ttataataat tgatatagaa tagatataga 2521 tattgatcta tatataatga taaatgtcta aaaaatagat aatatctagt agtaataggt 2581 gttaatatct aatatctact gtctcttatc tatttatact ttcttccttg gtgatcatct 2641 ctagccctgc ggttttaaat tctatctctg tgctattatc tctagccttg aagtatcttc 2701 tggactccag actcaactgc ctatttaata tctctcttaa atgtccatca agcatttaaa 2761 atgaaataag gttttgatat tcaccccctt tgacgagttc cccaaatctt ccgtttcctg 2821 ggagatggca ccatcatcct tccagtggtt gaggacctgg aagtcacact tgattccttt 2881 ccttccctcc ctcgaatcca atccaccagc aaggcctgtc agcttgactt ccacatctgc 2941 cccaaacctg ccaccctcac catagcccct ccactgccct atccctgcca ctgtcacgcc 3001 gctcccagaa cctcctcatc cacctctctg ctcccacttt cgccttctta tgagccttct 3061 accatacagc agacagaggg attttccttt tttaaataat taatatatat tttttatttc 3121 aatagctttt ggggtacgag tgggttttgg ttagacggag gagttgtatt gtggtgaagt 3181 cgagatttta gtgcacccgt gacccgatag agtgcattgt acccaatagg tagtttgtat 3241 ctctcgcccc actcccatcc tctgtctctc tgaccctcca aaatccatta taccagggga 3301 ccccgacacc tgggcggtag acctgcactg gtccacagcc tgttagaaac caggccgcac 3361 agcaggaggt gagcagcagg ccagtgagca tcaccgcctg agctccgcct cttgtcagat 3421 cagcggcagc attggattct cataggagag cgaatcttat tgtgaagtgt gcatgagagg 3481 gatccaggtt gcacactcct tatgagaatc ttgcctgatg atctgaggtg gaacagtttc 3541 atcctgaaac caatcccctg ccatccctca gttggtggaa aaattgtctt ccatgaaact 3601 ggtccctggt gccaaaaaga ttgggggcag ctgcattata ccatgacaga gggatctttc 3661 taaaacataa gccaatgcaa gtcactctcc ttaaaccctt cagtgacttt tcactgccct 3721 tagagcccgg gttcctccaa atctgtacct gtacctctga actctttccc accagtgttc 3781 tcacagctct tgggcagcaa tgacacctgc tctgtagaag ccttccctgg ctgacccatc 3841 taaaattgcc tcaaccccca actttctgtc tgtcataaga gtcaacttca ttttactcat 3901 atcacttatc tccatctgat atttatttat ttatgtagtc tctctgtctt cccatcccct 3961 cagcttatat tctgagctca atgtgaggtc ttttcttcat tactaggtcc atagaggaaa 4021 ctcagatcac tatttgatgg gtgaatgaat gcttcaataa atgaatgcat gcatgcatgc 4081 atgaaattca aaaaaaaaaa aaaaaa //