LOCUS BC039078 2202 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens unc-50 homolog (C. elegans), mRNA (cDNA clone
MGC:35056 IMAGE:5166015), complete cds.
ACCESSION BC039078
VERSION BC039078.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2202)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2202)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2202
/db_xref="H-InvDB:HIT000095496"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35056 IMAGE:5166015"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2202
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="HSD23"
/gene_synonym="UNCL"
/gene_synonym="URP"
/db_xref="GeneID:25972"
/db_xref="HGNC:HGNC:16046"
CDS 1157..1936
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="HSD23"
/gene_synonym="UNCL"
/gene_synonym="URP"
/codon_start=1
/product="unc-50 homolog (C. elegans)"
/protein_id="AAH39078.1"
/db_xref="GeneID:25972"
/db_xref="HGNC:HGNC:16046"
/translation="MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQM
DFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFV
LDMGFFETIKLLPWVVLIDCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVH
LNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPF
LKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRVK"
BASE COUNT 562 a 470 c 554 g 616 t
ORIGIN
1 cgcggcgcgc cccaagggcc ggctccgttg agggaaggga agcccgcccg gtggcggctg
61 gggtcggctg ctgggaggag gtggtgggct ggttcggacg tgggttgagg ctgtagcagg
121 actccaggtg aggcctgagg accactctgc cctcccgcgg cccgggctcg cgccgggggc
181 catttaatcc cgacagcttg cggcctgacg tcgctgcggc ctggcagtga ccatgtcggc
241 gtccggcccc tcggccggcg atagagttgc ggctaaaatg aaaggacgcc cagttacatt
301 tgcatcgtag ataaagaaag agcatttagt ataagcatgt ccgaaatgtt gcgtgggatg
361 taggcatact aaaaccttat tcgtggcctg tctgaaatcc aaatggagct gggtattctg
421 tgtttttatt tgctaaatct ggcagccgta cccgcggccc cgggcaggga gggagcagct
481 gggctcggcc agaccctgcc ggcgtctggg gggcctgcga agtggagggg agacgggcag
541 ccgggcagtg gccggcgttc cccggagctc ggaccggttg gactggactc cgacgctacc
601 gctccctctg ctgaactatt ccggatgtaa aacactaggg atcggagttt ttcttggttt
661 tttaatctca ttctagtgac cgagaagctt gctggcagtg cgctgatctg tgtgaatagg
721 ccatttattt gacctcttca gtaacactgt tctaaccggc tgaaactgct ttcttaggca
781 ttttcttaaa agcttggtgg ttaagagcac ggaatttcga gtcagatttc caatcttggc
841 tctatcacta tcctcggagt catggggcag tcacatcatc cctgtctctg taatggtagc
901 tgcccctgga taagtgttat taggtgattc agaagggtgg gctgttgccc ttgcttgagg
961 ttgcagtctg cggttcccaa gccccaagac ccgcctcaga actaactgca tttgcttttg
1021 actcctggcc tttctctagg gttgggaaga acatggaaag tgacctccct gccaaataac
1081 tcagaagagg agtgtcggta gccaaaagtt tcttcagaat acgtgtaaaa gaaatgtttt
1141 tcttccatct aggaagatgt taccgagtac ttcagtgaat tccttagtgc aggggaacgg
1201 agtcttgaat tccagggatg cggcaagaca cacagccgga gcgaaacgct acaaatatct
1261 gagaaggctt ttccgctttc ggcaaatgga ctttgaattt gctgcctggc agatgctcta
1321 cctgttcaca tccccacaga gagtttacag aaattttcat tatcgaaaac agacgaagga
1381 ccagtgggcc agagatgacc ctgctttctt ggtcctgtta agtatctggc tctgtgtgtc
1441 cactatagga tttggctttg tgctggacat gggattcttt gagacaataa agcttctccc
1501 ttgggttgta ctcatagatt gtgtaggcgt tggtcttctg atagcaactt taatgtggtt
1561 catctctaac aagtatttag tgaaacgaca gagcagagac tatgatgtgg aatggggcta
1621 tgcttttgat gtgcatctca atgcttttta tccactcctg gtcattttgc attttatcca
1681 gctttttttc atcaaccatg ttatcctgac agacacattt attggatatt tagttggaaa
1741 taccttatgg ttggttgcag ttggctatta tatctatgta actttcctgg gatacagtgc
1801 attgccattt ttgaaaaata cagtaattct tctgtatcca tttgcacctc tgattctgct
1861 ctacgggctt tccctggcac tgggatggaa cttcacccat actctctgtt ctttctataa
1921 gtacagagtg aaataaaaag tgagaagaag attcaatcgt aactgtgtca acagtattgt
1981 gaagtgatca tttcttgtaa aacttgtaaa taaactatca tctttgtaga tatcttaaag
2041 gtgtaaagtt tgcaaatttg aagaaatata tattaacact gtggtcaggt acattcctta
2101 aaactaatta aatgtacatt tctataataa atatttttta aactaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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