LOCUS BC039072 1797 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens C-type lectin domain family 1, member A, mRNA (cDNA clone MGC:34328 IMAGE:5178017), complete cds. ACCESSION BC039072 VERSION BC039072.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1797) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1797) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: o Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37577102. FEATURES Location/Qualifiers source 1..1797 /db_xref="H-InvDB:HIT000052131" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34328 IMAGE:5178017" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1797 /gene="CLEC1A" /gene_synonym="CLEC1" /gene_synonym="MGC34328" /db_xref="GeneID:51267" /db_xref="HGNC:HGNC:24355" /db_xref="MIM:606782" CDS 50..892 /gene="CLEC1A" /gene_synonym="CLEC1" /gene_synonym="MGC34328" /codon_start=1 /product="C-type lectin domain family 1, member A" /protein_id="AAH39072.1" /db_xref="GeneID:51267" /db_xref="HGNC:HGNC:24355" /db_xref="MIM:606782" /translation="MQAKYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRTEHRAPS STWRPVALTLLTLCLVLLIGLAALGLLFFQYYQLSNTGQDTISQMEERLGNTSQELQS LQVQNIKLAGSLQHVAEKLCRELYNKAGAHRCSPCTEQWKWHGDNCYQFYKDSKSWED CKYFCLSENSTMLKINKQEDLEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFT SELFHIIIDVTSPRSRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETL GEGD" BASE COUNT 542 a 421 c 365 g 469 t ORIGIN 1 gcccagggca atccgaccac atttcactct caccgctgta ggaatccaga tgcaggccaa 61 gtacagcagc acgagggaca tgctggatga tgatggggac accaccatga gcctgcattc 121 tcaaggctct gccacaactc ggcatccaga gccccggcgc acagagcaca gggctccctc 181 ttcaacgtgg cgaccagtgg ccctgaccct gctgactttg tgcttggtgc tgctgatagg 241 gctggcagcc ctggggcttt tgttttttca gtactaccag ctctccaata ctggtcaaga 301 caccatttct caaatggaag aaagattagg aaatacgtcc caagagttgc aatctcttca 361 agtccagaat ataaagcttg caggaagtct gcagcatgtg gctgaaaaac tctgtcgtga 421 gctgtataac aaagctggag cacacaggtg cagcccttgt acagaacaat ggaaatggca 481 tggagacaat tgctaccagt tctataaaga cagcaaaagt tgggaggact gtaaatattt 541 ctgccttagt gaaaactcta ccatgctgaa gataaacaaa caagaagacc tggaatttgc 601 cgcgtctcag agctactctg agtttttcta ctcttattgg acagggcttt tgcgccctga 661 cagtggcaag gcctggctgt ggatggatgg aacccctttc acttctgaac tgttccatat 721 tataatagat gtcaccagcc caagaagcag agactgtgtg gccatcctta atgggatgat 781 cttctcaaag gactgcaaag aattgaagcg ttgtgtctgt gagagaaggg caggaatggt 841 gaagccagag agcctccatg tcccccctga aacattaggc gaaggtgact gattcgccct 901 ctgcaactac aaatagcaga gtgagccagg cggtgccaaa gcaagggcta gttgagacat 961 tgggaaatgg aacataatca ggaaagacta tctctctgac tagtacaaaa tgggttctcg 1021 tgtttcctgt tcaggatcac cagcatttct gagcttgggt ttatgcacgt atttaacagt 1081 cacaagaagt cttatttaca tgccaccaac caacctcaga aacccataat gtcatctgcc 1141 ttcttggctt agagataact tttagctctc tttcttctca atgtctaata tcacctccct 1201 gttttcatgt cttccttaca cttggtggaa taagaaactt tttgaagtag aggaaataca 1261 ttgaggtaac atccttttct ctgacagtca agtagtccat cagaaattgg cagtcacttc 1321 ccagattgta ccagcaaata cacaaggaat tctttttgtt tgtttcagtt catactagtc 1381 ccttcccaat ccatcagtaa agaccccatc tgccttgtcc atgccgtttc ccaacaggga 1441 tgtcacttga tatgagaatc tcaaatctca atgccttata agcattcctt cctgtgtcca 1501 ttaagactct gataattgtc tcccctccat aggaatttct cccaggaaag aaatatatcc 1561 ccatctccgt ttcatatcag aactaccgtc cccgatattc ccttcagaga gattaaagac 1621 cagaaaaaag tgagcctctt catctgcacc tgtaatagtt tcagttccta ttttcttcca 1681 ttgacccata tttatacctt tcaggtactg aagatttaat aataataaat gtaaatactg 1741 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //