LOCUS BC039065 3411 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens alcohol dehydrogenase 6 (class V), mRNA (cDNA clone
MGC:34228 IMAGE:5184104), complete cds.
ACCESSION BC039065
VERSION BC039065.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3411)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11024646.
FEATURES Location/Qualifiers
source 1..3411
/db_xref="H-InvDB:HIT000052128"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34228 IMAGE:5184104"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3411
/gene="ADH6"
/gene_synonym="ADH-5"
/db_xref="GeneID:130"
/db_xref="MIM:103735"
CDS 84..971
/gene="ADH6"
/gene_synonym="ADH-5"
/codon_start=1
/product="ADH6 protein"
/protein_id="AAH39065.1"
/db_xref="GeneID:130"
/db_xref="MIM:103735"
/translation="MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVAT
GLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGEC
TSCLNSEGNFCIQFKQSKTQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAK
IDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAA
RIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVL
AGRADSTSLNWLLIIWQRS"
misc_feature 105..914
/gene="ADH6"
/gene_synonym="ADH-5"
/note="AdhC; Region: Zn-dependent alcohol dehydrogenases,
class III [Energy production and conversion]"
/db_xref="CDD:COG1062"
BASE COUNT 1020 a 736 c 647 g 1008 t
ORIGIN
1 gtgtaccttt gtactttcta cagtgaaagt tgctacagga tctccctttc tcaataaatt
61 catctgcggt ggagaaaatc agcatgagta ctacaggcca agtcatcaga tgcaaagcag
121 ccatactctg gaagcctggt gcaccatttt ctattgaaga ggtagaagtg gccccaccaa
181 aggcaaagga agttcgcata aaggttgtgg ccaccggact gtgtggtaca gagatgaaag
241 tgttggggag taaacacttg gacctcttgt atcccaccat cttgggccat gaaggggctg
301 gaatcgttga gagtattgga gaaggagtaa gcacagtgaa accaggtgac aaagttatca
361 cactctttct gccacagtgt ggagaatgta cctcttgcct gaattctgag ggcaattttt
421 gtatacaatt caaacagtca aaaacccaac tgatgtctga tggtaccagc aggtttacct
481 gcaagggaaa atcaatatat cactttggta ataccagcac cttctgtgaa tacacagtga
541 taaaggaaat ctcagttgcc aagattgatg cagtcgctcc tctagagaaa gtatgcctaa
601 ttagctgtgg cttttccact gggtttggtg ctgcaatcaa tactgccaag gtgactccag
661 gttctacctg tgctgtgttt ggcctgggag gagtcggctt gtctgttgtc atgggttgta
721 aagcagcagg agcagccagg atcattggag tggatgtcaa caaggagaaa tttaagaagg
781 cacaggaatt gggtgctact gagtgcctca accctcagga cttaaagaaa cccattcaag
841 aagttttatt tgatatgaca gatgctggta tagacttctg ctttgaggcc attggaaatc
901 tggacgttct ggctggaaga gcagacagca catccctaaa ctggttgctg attatatggc
961 agagaagttg aatctagatc cactaattac tcatactctg aatcttgata aaatcaatga
1021 agcagttgaa ttaatgaaaa ctggaaaatg gtaaactgcc cacataaatt ttatgtctgt
1081 gtgtttgaga ccaagagaaa gggtgtattg gcttgggagt agaagaaggg tcgtccctgc
1141 tgcagaagct gtatactgat aattgaagag gctttcagga atttgtaaag catctccttc
1201 ccctctgcat tttgttttat ttctagctaa taaaatacat aatcctgaaa gtatttaagt
1261 gttcacctac cgttactttt gccattagca ttgtatttcc aatatggatt tttttttttt
1321 ttacatgaca tattaatgga agtcagctta taaaattgta gctcaagttt aaaaacataa
1381 gaaggtagtt cacaaatagg ccattgttgt atttgttgtt ctactttggg ggagaagagg
1441 aattattcat aggattccta attctgaatc ctatctttga cccaaaaaac agaaaccagc
1501 cataacccag aaactggcat tccccacacg agtataagct tgcttaccta ctttttaccc
1561 ttggagtttc atgtcatttt aaaaaatctt cccatggctt atttaatctt ctcatttttc
1621 acctaaagag aaaaaaaatc tagtttactg ctctacaaag tgagaatttg aaatccaaaa
1681 cacaaatgtt gctctaaaaa tgttccaacc ttttttctct tcttcttttt ttcagtatcc
1741 gctgtatcct gttactttaa gtacaatgta atacatgcaa gacccaaagg atatttcacc
1801 aactcaatgg catttgatgt aattttcatg atttagaaga attattcacc caatcccatt
1861 tctatattct gacttctgat tcactccgca gtggacctat atctggcttc tgacctaacc
1921 atttcatcaa aattgttctt acgtaaccca gtgtcaccaa ggatcagcct ccttttcaga
1981 gctagattaa ggttggcttg aatcactcaa ctccacatcc ttcagacata aaaggtcaat
2041 gcaagatgct cccattttca tagttcctct acctgtggac ctttatattc ttgtacacta
2101 tatgtctctc tcacaggcct agacatgaaa ctctgccatt ttactctaaa gaaacaaaac
2161 tccgcattaa tgagtttatt gaagattcag gttaacctga atcaagttaa cccagtctca
2221 aatgctcact tatcctatct ccttggcaca aatctctcct ctcctggatt gccaaagaaa
2281 attcaaatta ttcttcaatt agtcaggatg atttgactat cagcagttca tagtacccat
2341 cttcataact aagccaccta gggatccagc agaaaaaaaa gggatgaggg gagtcatcat
2401 acaggaggtg gatcatttac caggatccac acttcctaca aagcggttgt aatattaaat
2461 aacaaaactg ttttttattc caatcttcac ataaaacagg aataattgta tactttctta
2521 ctaatgtgtt ccatggagtt tttcctccaa gaagtggctt aggggaaaat gagccccagt
2581 aatgctttgt ggcatccaat ccttctaccc cgaccctttg actttctgcc ccagcccctc
2641 ttagttctcc tagaattagg actaaggtta agtgccctct tgggatatga cttccttccc
2701 ttcctcttga tacaaaaaga gcctattacc aaccctcata cacacaagag ttcccttcct
2761 agttgcagac tcttctgctc cagctggact cccctagctc tggactccca ctagatcaca
2821 caggggtccc tgcatgtcag taaactttgg atgaccttgg gagaccaaaa aatggaatat
2881 cattttttga tctaaacaaa atagtttcct gatttaacac tggccaggaa ggtgggctgc
2941 accctcagtc tctctctccc atcatggttt tcacatgata tcaaaggact ctcataacag
3001 tctgattctt atgagttggg catcctgtgt ttccctttag gggcctgctt ccttcaaata
3061 gaggagatgg gtgctatgaa acctattcac tctggacttg ggatggctct tctccatctt
3121 cccaagtctg agctggagcc tccatgccca actctgctct gctcttctat ttcctgacag
3181 cagctaaggc atgttcctgt tctgccccca aattgacctt actaacagtg agaacttgga
3241 ggagtcttcg ggtcttggga aatccaagtt ttcccggaaa cgttttgttg taaacagtgt
3301 ccacactctt tgctccaata aagctcggtt ccttaagcca caaaaaaaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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