LOCUS BC039004 3211 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens carnitine O-octanoyltransferase, mRNA (cDNA clone MGC:47608 IMAGE:5242962), complete cds. ACCESSION BC039004 VERSION BC039004.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3211) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3211) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: f Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31542324. FEATURES Location/Qualifiers source 1..3211 /db_xref="H-InvDB:HIT000052112" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47608 IMAGE:5242962" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3211 /gene="CROT" /gene_synonym="COT" /db_xref="GeneID:54677" /db_xref="HGNC:HGNC:2366" /db_xref="MIM:606090" CDS 186..2024 /gene="CROT" /gene_synonym="COT" /codon_start=1 /product="carnitine O-octanoyltransferase" /protein_id="AAH39004.1" /db_xref="GeneID:54677" /db_xref="HGNC:HGNC:2366" /db_xref="MIM:606090" /translation="MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVKPFAN QEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVN FAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNTPLDMNQFR MLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELL RQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVY SMEDSSPHVTPEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMI MVNISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREAS DLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHG RTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLL GLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFF YHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQLMNSTHL" BASE COUNT 996 a 575 c 701 g 939 t ORIGIN 1 gggagcgagc cggtgctgct gcaggctgag gctgcggcag aggcggcgag gcgcgggcgg 61 tgaggacgga cagtcaccga cttagtccag ttccctgtga tctcaaaaca attgttgcag 121 caggctcctg gcagtctcaa gcagttcatc ttcttggtgt actggtttcc tattgtgatt 181 ttatcatgga aaatcaattg gctaaatcaa ctgaagaacg aacatttcag taccaggatt 241 ctcttccatc actgcctgtt ccttcacttg aagaatcatt aaaaaaatac cttgaatcag 301 tgaaaccatt tgcaaatcaa gaagaatata agaaaactga agaaatagtt caaaaatttc 361 aaagtgggat tggagaaaaa ttgcaccaga aattgcttga aagagcaaaa ggaaaaagaa 421 attggctgga agagtggtgg ctgaatgttg cctatctgga tgttcgtata ccatcacaat 481 tgaatgtcaa ctttgcgggt cctgcagctc attttgaaca ctactggcct ccaaaggaag 541 ggactcaatt agaaagagga agtataactc tttggcataa cttgaactac tggcagctat 601 taagaaaaga aaaagtgcct gttcataaag ttggaaatac tcctctagat atgaatcaat 661 tccgaatgct attttctacc tgcaaggttc caggaattac tagagactcc attatgaatt 721 attttaggac tgagagtgaa gggcgttccc caaaccacat tgtagtgctg tgtcgaggcc 781 gagcttttgt ctttgatgta atacatgaag gatgtttggt caccccgcca gagcttctca 841 gacaactgac atatatccac aagaagtgcc atagtgaacc tgatggacct gggattgcag 901 cattaactag tgaggagcga actcgatggg ctaaggcacg agaatatctg attggtcttg 961 atccagagaa cttggctttg ttagaaaaaa ttcagagtag tttactggta tattccatgg 1021 aggatagcag tccacatgta acaccagagg attattctga gattattgca gccatcctta 1081 ttggagatcc aacagtacgc tggggtgaca aatcctataa cttgatttcc ttttctaatg 1141 gagtatttgg ctgtaattgt gatcatgctc cttttgatgc aatgattatg gtgaacatca 1201 gttattatgt ggatgagaaa atttttcaga atgaaggaag atggaagggt tcagagaagg 1261 tacgagatat accacttcca gaagagctca ttttcattgt ggatgagaaa gttttaaatg 1321 acatcaacca agctaaagcc cagtatctca gggaggcatc tgatctacag attgcggctt 1381 atgcctttac atcttttggc aaaaagctaa ccaagaacaa gatgcttcac ccggatacgt 1441 ttattcagct tgcacttcag ctggcctatt acagacttca tggacaccct ggttgttgct 1501 atgaaacagc tatgacaaga catttttatc atggccgtac agagactatg cgatcatgca 1561 cagttgaagc agtgaggtgg tgccagtcca tgcaggatcc ttctgtcaat cttcgtgagc 1621 ggcagcaaaa gatgttacaa gcttttgcaa agcataataa aatgatgaaa gattgttcag 1681 ctggaaaagg atttgatcgt caccttttag gtctcttact catagcaaaa gaggaaggtc 1741 ttcctgttcc agaactcttt acggacccac ttttttccaa aagcggagga ggtggaaatt 1801 ttgttctctc aacaagtctg gttggctatt tacgagtcca gggagtggta gttcccatgg 1861 tacacaatgg ttatggattt ttctaccata tcagagatga caggtttgtt gtggcctgtt 1921 cagcctggaa atcctgtccc gagactgatg cggaaaagct agttcagctg actttttgtg 1981 cttttcatga tatgatacag ctgatgaact ctactcatct ttagagatga atcatctatt 2041 aagcacttac caaaacatat cattaaactg agtgctggga gtgagttggt aatatgagat 2101 gggaaggaat gttgacttgc taacattcct ttaacaagtt aagaaaactt gttaaatgta 2161 gaaattagta gaatcatgct ctctaaattt attctgccat agaaggtaga aatattttta 2221 agctcctctg atgcagcagc aatgcaaatt atgacatagt gaatatagaa ctatgcagta 2281 tttaagcctc aacaatccaa atctacaaac tttaacaatg caagtcttac tctaattttt 2341 aagtattttt gttggtactt acatgggtta taaatcctct ctctggacat caatgtagag 2401 tccatctttc aagcacttta atttttttag ctgccaaagg gtatgaatta cattattgta 2461 tgctaatttc cctgaaatca atgccttcta tgttcaccac agggatacaa gcctgttatg 2521 tttgatggga aagaccacta caatctaatg gtgatctaaa ataacttttt tgggctgggt 2581 gcagtggctc atgcctataa tcttagcact ttgggaggcc aaggtaggag gattgcttga 2641 agctaggagt ttgagaccag cctgggcaac agggtaaggt cctgtctcta caagatcaaa 2701 aacttagccg ggtatggtgg tgcatgtgtg cctgtagtcc aagctacttg aaggctgaga 2761 caggaggatc ggttgagccc aggaggttgt ggctgcagtg agctgtgatg tgcccttatg 2821 ctatagcctg ggcaagagcg tgagaccctg tctcaaagaa gaaaaaaaga gaaaaataac 2881 tcttttgaac aaacagacaa attagctagt agtatggaga tgtataccct ctattacaca 2941 cataaaaccg taacaaaatt cattgtggtg tattataatt agttttgtga atagaaaaat 3001 aaagcactta tgtttaaatt tgttacagtg acttttaaag gattaatgtt gaatcacatt 3061 gtcagaattt tttcctcctc gctgttcaat tttgtagttt ttactctcaa aaaatgaaat 3121 tctcaaaatt atatagcttt ttgttttgtt tgaataaatg attcattcct gttaaaaaaa 3181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //