LOCUS BC038999 957 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds. ACCESSION BC038999 VERSION BC038999.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 957) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 957) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: b Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22538474. FEATURES Location/Qualifiers source 1..957 /db_xref="H-InvDB:HIT000095451" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47606 IMAGE:4943285" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..957 /gene="UBB" /gene_synonym="MGC8385" /db_xref="GeneID:7314" /db_xref="HGNC:HGNC:12463" /db_xref="MIM:191339" CDS 108..797 /gene="UBB" /gene_synonym="MGC8385" /codon_start=1 /product="ubiquitin B" /protein_id="AAH38999.1" /db_xref="GeneID:7314" /db_xref="HGNC:HGNC:12463" /db_xref="MIM:191339" /translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST LHLVLRLRGGC" BASE COUNT 256 a 247 c 252 g 202 t ORIGIN 1 ccacgcgtcc gaggggcggt tggctttgtt gggtgagctt gtttgtgtcc ctgtgggtgg 61 acgtggttgg tgattggcag gatcctggta tccgctaaca ggtcaaaatg cagatcttcg 121 tgaaaaccct taccggcaag accatcaccc ttgaggtgga gcccagtgac accatcgaaa 181 atgtgaaggc caagatccag gataaggaag gcattccccc cgaccagcag aggctcatct 241 ttgcaggcaa gcagctggaa gatggccgta ctctttctga ctacaacatc cagaaggagt 301 cgaccctgca cctggtcctg cgtctgagag gtggtatgca gatcttcgtg aagaccctga 361 ccggcaagac catcaccctg gaagtggagc ccagtgacac catcgaaaat gtgaaggcca 421 agatccagga taaagaaggc atccctcccg accagcagag gctcatcttt gcaggcaagc 481 agctggaaga tggccgcact ctttctgact acaacatcca gaaggagtcg accctgcacc 541 tggtcctgcg tctgagaggt ggtatgcaga tcttcgtgaa gaccctgacc ggcaagacca 601 tcactctgga ggtggagccc agtgacacca tcgaaaatgt gaaggccaag atccaagata 661 aagaaggcat cccccccgac cagcagaggc tcatctttgc aggcaagcag ctggaagatg 721 gccgcactct ttctgactac aacatccaga aagagtcgac cctgcacctg gtcctgcgcc 781 tgaggggtgg ctgttaattc ttcagtcatg gcattcgcag tgcccagtga tggcattact 841 ctgcactata gccatttgcc ccaacttaag tttagaaatt acaagtttca gtaatagctg 901 aacctgttca aaatgttaat aaaggtttcg ttgcatggta gcaaaaaaaa aaaaaaa //