LOCUS BC038990 941 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
3, mRNA (cDNA clone MGC:47750 IMAGE:6018899), complete cds.
ACCESSION BC038990
VERSION BC038990.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110937.
FEATURES Location/Qualifiers
source 1..941
/db_xref="H-InvDB:HIT000052108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47750 IMAGE:6018899"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..941
/gene="PSMA3"
/gene_synonym="HC8"
/gene_synonym="MGC12306"
/gene_synonym="MGC32631"
/gene_synonym="PSC3"
/db_xref="GeneID:5684"
/db_xref="HGNC:HGNC:9532"
/db_xref="MIM:176843"
CDS 44..811
/gene="PSMA3"
/gene_synonym="HC8"
/gene_synonym="MGC12306"
/gene_synonym="MGC32631"
/gene_synonym="PSC3"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 3"
/protein_id="AAH38990.1"
/db_xref="GeneID:5684"
/db_xref="HGNC:HGNC:9532"
/db_xref="MIM:176843"
/translation="MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKD
GVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSN
FGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYG
YWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVG
ELTNGRHEIVPKDIREEAEKYAKESLKEEDESDDDNM"
BASE COUNT 303 a 163 c 205 g 270 t
ORIGIN
1 cacgcgtccg ggaatcccta cgcgtccctt tgggtttagc acgatgagct caatcggcac
61 tgggtatgac ctgtcagcct ctacattctc tcctgacgga agagtttttc aagttgaata
121 tgctatgaag gctgtggaaa atagtagtac agctattgga atcagatgca aagatggtgt
181 tgtctttggg gtagaaaaat tagtcctttc taaactttat gaagaaggtt ccaacaaaag
241 actttttaat gttgatcggc atgttggaat ggcagtagca ggtttgttgg cagatgctcg
301 ttctttagca gacatagcaa gagaagaagc ttccaacttc agatctaact ttggctacaa
361 cattccacta aaacatcttg cagacagagt ggccatgtat gtgcatgcat atacactcta
421 cagtgctgtt agaccttttg gctgcagttt catgttaggg tcttacagtg tgaatgacgg
481 tgcgcaactc tacatgattg acccatcagg tgtttcatac ggttattggg gctgtgccat
541 cggcaaagcc aggcaagctg caaagacgga aatagagaag cttcagatga aagaaatgac
601 ctgccgtgat atcgttaaag aagttgcaaa aataatttac atagtacatg acgaagttaa
661 ggataaagct tttgaactag aactcagctg ggttggtgaa ttaactaatg gaagacatga
721 aattgttcca aaagatataa gagaagaagc agagaaatat gctaaggaat ctctgaagga
781 agaagatgaa tcagatgatg ataatatgta acatttactc cagcatctat tgtattttaa
841 atttctactc cagtccaatg taactattta gccctggatt atacatactg tccaattttc
901 attaaatttt tgtcttataa ctattaaaaa aaaaaaaaaa a
//