LOCUS BC038981 2790 bp mRNA linear HTC 01-SEP-2006
DEFINITION Homo sapiens huntingtin interacting protein 1 related, mRNA (cDNA
clone IMAGE:5752655), **** WARNING: chimeric clone ****.
ACCESSION BC038981
VERSION BC038981.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505192
This clone has the following problem: chimeric.
FEATURES Location/Qualifiers
source 1..2790
/db_xref="H-InvDB:HIT000095440"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5752655"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 572 a 859 c 866 g 493 t
ORIGIN
1 cacctccctc gctctcccac accactggca ccaggccccg gacacccgct ctgctgcagg
61 agaatggcta ctcatcacac gctgtggatg ggactggccc tgctgggggt gctgggcgac
121 ctgcaggcag caccggaggc ccaggtctcc gtgcagccca acttccagca ggacaaggag
181 tctcaggagc aggggctgcg gcagaggctg ctggacgagc agttcgcagt gttgcggggc
241 gctgctgccg aggccgcggg catcctgcag gatgccgtga gcaagctgga cgaccccctg
301 cacctgcgct gtaccagctc cccagactac ctggtgagca gggcccagga ggccttggat
361 gccgtgagca ccctggagga gggccacgcc cagtacctga cctccttggc agacgcctcc
421 gccctggtgg cagctctgac ccgcttctcc cacctggctg cggataccat catcaatggc
481 ggtgccacct cgcacctggc tcccaccgac cctgccgacc gcctcataga cacctgcagg
541 gagtgcgggg cccgggctct ggagctcatg gggcagctgc aggaccagca ggctctgcgg
601 cacatgcagg ccagcctggt gcggacaccc ctgcagggca tccttcagct gggccaggaa
661 ctgaaaccca agagcctaga tgtgcggcag gaggagctgg gggccgtggt cgacaaggag
721 atggcggcca catccgcagc cattgaagat gctgtgcgga ggattgagga catgatgaac
781 caggcacgcc acgccagctc gggggtgaag ctggaggtga acgagaggat cctcaactcc
841 tgcacagacc tgatgaaggc tatccggctc ctggtgacga catccactag cctgcagaag
901 gagatcgtgg agagcggcag gggggcagcc acgcagcagg aattttacgc caagaactcg
961 cgctggaccg aaggcctcat ctcggcctcc aaggctgtgg gctggggagc cacacagctg
1021 gtggaggcag ctgacaaggt ggtgcttcac acgggcaagt atgaggagct catcgtctgc
1081 tcccacgaga tcgcagccag cacggcccag ctggtggcgg cctccaaggt gaaggccaac
1141 aagcacagcc cccacctgag ccgcctgcag gaatgttctc gcacagtcaa tgagagggct
1201 gccaatgtgg tggcctccac caagtcaggc caggagcaga ttgaggacag agacaccatg
1261 gatttctccg gcctgtccct catcaagctg aagaagcagg agatggagac gcaggtgcgt
1321 gtcctggagc tggagaagac gctggaggct gaacgcatgc ggctggggga gttgcggaag
1381 caacactacg tgctggctgg ggcatcaggc agccctggag aggaggtggc catccggccc
1441 agcactgccc cccgaagtgt aaccaccaag aaaccacccc tggcccagaa gcccagcgtg
1501 gcccccagac aggaccacca gcttgacaaa aaggatggca tctacccagc tcaactcgtg
1561 aactactagg ccccccaggg gtccagcagg gtggctggtg acaggcctgg gcctctgcaa
1621 ctgccctgac aggaccgaga ggccttgccc ctccacctgg tgcccaagcc tcccgcccca
1681 ccgtctggat caatgtcttc aaggcccctg gcccttactg agcctgcagg gtcctgggcc
1741 atgtgggtgg tgcttctgga tgtgagtctc ttatttatct gcagaaggaa ctttggggtg
1801 cagccaggac ccggtaggcc tgagcctcaa ctcttcagaa aatagtgttt ttaatattcc
1861 tcttcagaaa atagtgtttt taatattctg agctagagct cttcttccta cgtttgtagt
1921 cagcacactg ggaaaccggg ccagcgtggg gctccctgcc ttctggactc ctgaaggtcg
1981 tggatggatg gaaggcacac agcccgtgcc ggctgatggg acgagggtca ggcatcctgt
2041 ctgtggcctt ctggggcacc gattctacca ggccctccag ctgcgtggtc tccgcagacc
2101 aggctctgtg tgggctagag gaatgtcgcc cattactcct caggcctggc cctcgggcct
2161 ccgtgatggg agccccccag gaggggtcag atgctggaag gggccgcttt ctggggagtg
2221 aggtgagaca tagcggccca ggcgctgcct tcactcctgg agtttccatt tccagctgga
2281 atctgcagcc acccccattt cctgttttcc attcccccgt tctggccgcg ccccactgcc
2341 cacctgaagg ggtggtttcc agccctccgg agagtgggct tggccctagg ccctccagct
2401 cagccagaaa aagcccagaa acccaggtgc tggaccaggg ccctcaggga ggggaccctg
2461 cggctagagt gggctaggcc ctggctttgc ccgtcagatt tgaacgaatg tgtgtccctt
2521 gagcccaagg agagcggcag gaggggtggg accaggctgg gaggacagag ccagcagctg
2581 ccatgccctc ctgctccccc caccccagcc ctagcccttt agcctttcac cctgtgctct
2641 ggaaaggcta ccaaatactg gccaaggtca ggaggagcaa aaatgagcca gcaccagcgc
2701 cttggctttg tgttagcatt tcctcctgaa gtgttctgtt ggcaataaaa tgcactttga
2761 ctgttaaaaa aaaaaaaaaa aaaaaaaaaa
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