LOCUS BC038945 1556 bp mRNA linear HTC 01-SEP-2006
DEFINITION Homo sapiens occludin/ELL domain containing 1, mRNA (cDNA clone
IMAGE:5200893), with apparent retained intron.
ACCESSION BC038945
VERSION BC038945.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1556)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375755
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1556
/db_xref="H-InvDB:HIT000095418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5200893"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 381 a 480 c 401 g 294 t
ORIGIN
1 ctgcagtaaa tgcacaaccc ggacggaagt gcctctccga cagcagatcc aggctcggag
61 ctccagacgc tgggacaggc cgcccgcaga ccacccccgc cgcgcgcggg acacgacgcc
121 ccccgcagga cccgcccatc agcccggaaa cccctgagct gcttctcccg gaggccgatg
181 cccacccggg agcccccaaa gactcgcggc tcccgggggc acctgcatac tcacccgcct
241 gggcctgggc ccccggtgag cctgaccggg agggggtccc caggccgggc ctctaggcaa
301 aagatttagc ccctccagtt tgagggactc cggtttcccg acaccccgat ttaactccag
361 accacgattc ctgtggcagc tgcagggact ggcgccccga ggcctcaaaa ccagcgcccc
421 ccgccctccg tgccagcccc agccgggacc ccacaaggca aagaccaaga agattgtgtt
481 tgaggatgag ttgctctccc aggccctcct gggcgccaag aagcctattg gagccatccc
541 taaggggcat aagcctaggc cccacccagt gcccgactat gagctaagga ggcccaagtt
601 gcagcccggg tttggaggga gtttgagatg aagcgaatgt ttcttttttt tttctttctt
661 ttgagacaga atctcgctct gtcacccagg cgggagtgca gtggtatgat ctcagctcac
721 tgcaacctca gcgtcccggg ttcaagcggt tctcctgcct cagctgggat cacaggcgcc
781 caccaccgtg cctggcaaat ttttgtattt gtagtagaga tggggtttca ccatgttggc
841 caggctggtc tcgaactcct gacctcaagt gatccgccca cctcggcctc ccagactgct
901 gggattacag gcatgagcca ccttgcccgg ctcacccggt cgcctgtgcc cagtttcaag
961 gagagaaaat tgaggctcgg agaatgaaag gcagagagtt aagcagcttg aaggccacag
1021 ggcagactgc tgcaaagact tccgggtctc gccctgccta ggatcctggc ttcctggaca
1081 agcaggctcg ctgccactac ctgaagggta aactgaggca tctcaagact cagatccaga
1141 aattcgatga ccaaggagac agcgagggct ccgtgtactt ctaagtgccc ctgcagatgg
1201 gcagagggat gcatggggat gcaggtccct tgcatttctt ggtatctctc agcttttcct
1261 cttgcagctc cccctaccag gggtcgcttt ctcctggatt gcaaatgcct cttcagtttg
1321 gactcagctc tgacagcccc tcctccagga aggccttcca ggacttcctc ctctgggtcc
1381 tctagctctg accctacagg gactccagat ctcaacctgt tccctggaag tagggcctgc
1441 tctccatccc agtgaaataa acatgtatta gataaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaag
//