LOCUS BC038840 1580 bp mRNA linear HUM 21-OCT-2003
DEFINITION Homo sapiens N-acetylated alpha-linked acidic dipeptidase 2, mRNA
(cDNA clone IMAGE:5201306), complete cds.
ACCESSION BC038840
VERSION BC038840.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1580)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1580)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451905
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1580
/db_xref="H-InvDB:HIT000052078"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5201306"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1580
/gene="NAALAD2"
/gene_synonym="NAADALASE2"
/gene_synonym="NAALADASE2"
/db_xref="GeneID:10003"
CDS 96..1049
/gene="NAALAD2"
/gene_synonym="NAADALASE2"
/gene_synonym="NAALADASE2"
/codon_start=1
/product="NAALAD2 protein"
/protein_id="AAH38840.1"
/db_xref="GeneID:10003"
/translation="MAESRGRLYLWMCLAAALASFLMGFMVGWFIKPLKETTTSVRYH
QSIRWKLVSEMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVH
YDVLLSYPNETNANYISIVDEHETEIFKTSYLEPPPDGYENVTNIVPPYNAFSAQGMP
EGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILY
SDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEG
VGIPRIPVHPIGYNDAEILLRYSFLVGYEIKIFCTSCLFSH"
misc_feature 558..776
/gene="NAALAD2"
/gene_synonym="NAADALASE2"
/gene_synonym="NAALADASE2"
/note="PA; Region: PA domain. The PA (Protease associated)
domain is found as an insert domain in diverse proteases.
The PA domain is also found in a plant vacuolar sorting
receptor and members of the RZF family"
/db_xref="CDD:pfam02225"
BASE COUNT 551 a 294 c 288 g 447 t
ORIGIN
1 gagctcacag cctcctgcca gcgcgctctc tgtttctctg tagccccgaa gctcgcgaat
61 gtagcaggcg ccccaagctc ggtcctcaag aagccatggc ggaatccagg ggccgtctgt
121 acctttggat gtgcttggct gctgcgctgg catctttcct gatgggattt atggtgggct
181 ggtttattaa gcctctcaaa gaaacaacca cttctgtgcg ctatcatcaa agtatacggt
241 ggaaactggt atccgaaatg aaagctgaaa acatcaaatc atttcttcgt tcttttacaa
301 agcttcctca tctggcagga acagaacaaa atttcttgct tgccaagaaa atccaaaccc
361 agtggaagaa atttggacta gattcagcca agttggttca ttatgatgtc ctcttatctt
421 accccaatga gacaaatgcc aactatatat cgattgtgga tgaacatgaa actgagattt
481 tcaaaacatc ataccttgaa ccaccaccag atggctatga gaatgttaca aatattgtgc
541 caccatataa tgctttctca gcccaaggca tgccagaggg agatcttgta tatgtgaact
601 atgctcgcac tgaagacttt ttcaaactag aaagagagat gggcatcaac tgtactggga
661 agattgttat tgcaagatat ggaaaaatct tcagaggaaa taaagttaaa aatgccatgt
721 tagcaggagc cataggaatc atcttgtact cagatccagc tgactacttt gctcctgagg
781 tacagccata tcccaaagga tggaatcttc ctggaactgc agcccagaga ggaaatgtgt
841 taaatttgaa tggtgctggt gacccactca ctccaggcta tccagcaaaa gaatacactt
901 tcagacttga tgttgaagaa ggagtgggaa tcccccgaat acctgtacat cccattggat
961 ataatgatgc agaaatatta ttacggtata gttttcttgt tggatatgag attaagatat
1021 tttgcactag ttgtctattt tctcattgaa aaccaatatg gcattcttat gttaaacaca
1081 aagttttata actaaataac tcctgaaata ggaataacag agtatactat ctttttattt
1141 cataaaagta gtcattttag tgactaagaa atcaaaataa aatatcgctc tgttcgctac
1201 aaatgaaatt ctcaaataca aagctatgtc ctaagataat tctgatttga gatttttcaa
1261 gcaattgaat tttcataggt attcattaga tatttatatt caacgtctag tataagaata
1321 tgacaatgcc ccccacttac tagagatatg accttggatc agttgcttaa actttctcca
1381 gctcagtttc tttatttgta agatgaggct agtaactgtt tctccttgat agggttatta
1441 taagatcata tgagtaaaat acatagcacc gtatttagaa tatagtaaac aaacaattat
1501 tgtaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa
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