LOCUS       BC038830                 958 bp    mRNA    linear   HUM 30-JAN-2008
DEFINITION  Homo sapiens SNF8, ESCRT-II complex subunit, homolog (S.
            cerevisiae), mRNA (cDNA clone MGC:47686 IMAGE:3900806), complete
            cds.
ACCESSION   BC038830
VERSION     BC038830.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 958)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 82 Row: a Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21361379.
FEATURES             Location/Qualifiers
     source          1..958
                     /db_xref="H-InvDB:HIT000052074"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:47686 IMAGE:3900806"
                     /tissue_type="Pancreas, epithelioid carcinoma"
                     /clone_lib="NIH_MGC_70"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..958
                     /gene="SNF8"
                     /gene_synonym="Dot3"
                     /gene_synonym="EAP30"
                     /gene_synonym="VPS22"
                     /db_xref="GeneID:11267"
                     /db_xref="HGNC:HGNC:17028"
                     /db_xref="MIM:610904"
     CDS             83..856
                     /gene="SNF8"
                     /gene_synonym="Dot3"
                     /gene_synonym="EAP30"
                     /gene_synonym="VPS22"
                     /codon_start=1
                     /product="SNF8, ESCRT-II complex subunit, homolog (S.
                     cerevisiae)"
                     /protein_id="AAH38830.1"
                     /db_xref="GeneID:11267"
                     /db_xref="HGNC:HGNC:17028"
                     /db_xref="MIM:610904"
                     /translation="MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFK
                     TNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGV
                     QIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGI
                     IPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLKE
                     GLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP"
BASE COUNT          245 a          231 c          308 g          174 t
ORIGIN      
        1 ccacgcgtcc gccggcggcg gagtccggga cgtggagacc cggggtcccg gcagccgggc
       61 ggcccgcggg cccagggtgg ggatgcaccg ccgcggggtg ggagctggcg ccatcgccaa
      121 gaagaaactt gcagaggcca agtataagga gcgagggacg gtcttggctg aggaccagct
      181 agcccagatg tcaaagcagt tggacatgtt caagaccaac ctggaggaat ttgccagcaa
      241 acacaagcag gagatccgga agaatcctga gttccgtgtg cagttccagg acatgtgtgc
      301 aaccattggc gtggatccgc tggcctctgg aaaaggattt tggtctgaga tgctgggcgt
      361 gggggacttc tattacgaac taggtgtcca aattatcgaa gtgtgcctgg cgctgaagca
      421 tcggaatgga ggtctgataa ctttggagga actacatcaa caggtgttga agggaagggg
      481 caagttcgcc caggatgtca gtcaagatga cctgatcaga gccatcaaga aactaaaggc
      541 acttggcact ggcttcggca tcatccctgt gggcggcact tacctcattc agtctgttcc
      601 agctgagctc aatatggatc acaccgtggt gctgcagctg gcagagaatg gctacgtgac
      661 tgtcagtgag atcaaagcca gtcttaaatg ggagaccgag cgagcgcggc aagtgctgga
      721 acacctgctg aaggaagggt tggcgtggct ggacttacag gccccagggg aggcccacta
      781 ctggctgcca gctctcttca ctgacctcta ctcccaggag attacagctg aggaggccag
      841 agaagccctc ccctgactgc atgtggaagg gcacacagca gcaggcaggg aggaggcgga
      901 ggtggcaaat aaacctgggc aattttgttt atacaaaaaa tagaaaaaaa aaaaaaaa
//