LOCUS BC038801 1627 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens ubiquitin specific peptidase 8, mRNA (cDNA clone
IMAGE:4341874), partial cds.
ACCESSION BC038801
VERSION BC038801.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1627)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281375.
FEATURES Location/Qualifiers
source 1..1627
/db_xref="H-InvDB:HIT000095392"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4341874"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1627
/gene="USP8"
/gene_synonym="HumORF8"
/gene_synonym="KIAA0055"
/gene_synonym="UBPY"
/db_xref="GeneID:9101"
/db_xref="MIM:603158"
CDS 192..>1627
/gene="USP8"
/gene_synonym="HumORF8"
/gene_synonym="KIAA0055"
/gene_synonym="UBPY"
/codon_start=1
/product="USP8 protein"
/protein_id="AAH38801.1"
/db_xref="GeneID:9101"
/db_xref="MIM:603158"
/translation="MPAVASVPKELYLSSSLKDLNKKTEVKPEKISTKSYVHSALKIF
KTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEA
ERLSESLKLRYEEAEVRKKLEEKDRQEEAQRLQQKRQETGREDGGTLAKGSLENVLDS
KDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS
LSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS
LKDALFKWESKTVLRNEPLVLEGGYENWLLCYPQYTTNAKVTPPPRRQNEEVSISLDF
TYPSLEESIPSKPAAQTPPASIEVDENIELISGQNERMGPLNISTPVEPVAASKSDVS
PIIQPVPSIKNVPQIDRTKKPAVKLPEEHRIKSESTNHEQQSPQSGKVIPDRSTKPVV
FSPTLMLTDEEKARIHAETALLMEKKKK"
BASE COUNT 564 a 312 c 365 g 386 t
ORIGIN
1 ccacgcgtcc gggggtgagc tgggctggct tccgtcctgg tagccaaggc taattctccc
61 tcgagttctt gggagatggg catttggcga gaaggctggc gttagtgaag cgcgcccggc
121 gtcacggaaa gaagcacttg taaggaaata tagcatccat tgtgaaagtg gaaaagtaaa
181 gataattcat catgcctgct gtggcttcag ttcctaaaga actctacctc agttcttcac
241 taaaagacct taataagaag acagaagtta aaccagagaa aataagcact aagagttatg
301 tgcacagtgc cctgaagatc tttaagacag cagaagaatg cagattagat cgtgatgagg
361 aaagggccta tgtactatat atgaaatacg tgactgttta taatcttatc aaaaaaagac
421 ctgatttcaa gcaacagcag gattatttcc attcaatact tggacctgga aacatcaaaa
481 aagctgtcga agaagctgaa agactctctg aaagccttaa attaagatat gaagaagctg
541 aagtccggaa aaaacttgag gaaaaagaca ggcaggagga agcacagcgg ctacaacaaa
601 aaaggcagga aacaggaaga gaggatggtg gcacattggc taaaggctct ttggagaatg
661 ttttggattc caaagacaaa acccaaaaga gcaatggtga aaagaatgaa aaatgtgaga
721 ccaaagagaa aggagcaatc acagcaaagg aactatacac aatgatgacg gataaaaaca
781 tcagcttgat tataatggat gctcgaagaa tgcaggatta tcaggattcc tgtattttac
841 attctctcag tgttcctgaa gaagccatca gtccaggagt cactgctagt tggattgaag
901 cacacctgcc agatgattct aaagacacat ggaagaagag ggggaatgtg gagtatgtgg
961 tacttcttga ctggtttagt tctgccaaag atttacagat tggaacaact ctccggagtc
1021 tgaaagatgc acttttcaag tgggaaagta aaactgtcct gcgcaatgag cctttggttt
1081 tagagggagg ctatgaaaac tggctccttt gttatcccca gtatacaaca aatgctaagg
1141 tcactccacc cccacgacgc cagaatgaag aggtgtctat ctcattggat tttacttatc
1201 cctcattgga agaatcaatt ccttctaaac ctgctgccca gacgccacct gcatctatag
1261 aagtagatga aaatatagaa ttgataagtg gtcaaaatga gagaatggga ccactgaata
1321 tatcaactcc agttgaacca gttgctgctt ctaaatctga tgtttcaccc ataattcagc
1381 cagtgcctag tataaagaat gttccacaga ttgatcgtac taaaaaacca gcagtcaaat
1441 tgcctgaaga gcatagaata aaatctgaaa gtacaaacca tgagcaacaa tctcctcaga
1501 gtggaaaagt tattcctgat cgttccacca agccagtagt tttttctcca actctcatgt
1561 taacagatga agaaaaggct cgtattcatg cagaaactgc tcttctaatg gaaaaaaaaa
1621 aaaaaaa
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