LOCUS BC038787 1819 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens cylicin, basic protein of sperm head cytoskeleton 1,
mRNA (cDNA clone IMAGE:5271764), partial cds.
ACCESSION BC038787
VERSION BC038787.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1819)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1819)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: o Column: 14.
FEATURES Location/Qualifiers
source 1..1819
/db_xref="H-InvDB:HIT000095382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5271764"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1819
/gene="CYLC1"
/gene_synonym="CYCL1"
/db_xref="GeneID:1538"
/db_xref="MIM:603121"
CDS <1..1693
/gene="CYLC1"
/gene_synonym="CYCL1"
/codon_start=2
/product="CYLC1 protein"
/protein_id="AAH38787.1"
/db_xref="GeneID:1538"
/db_xref="MIM:603121"
/translation="RGQTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSY
ATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCS
QKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQS
DDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKK
VKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPEST
DTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKD
SKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEM
ESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTE
SEESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVPP
SREKPPLPACEPSLPSPKVRRLCWCKMPPPPPKPRYAPLIQRRQRLGVRRCQLLM"
BASE COUNT 810 a 281 c 360 g 368 t
ORIGIN
1 taggggacag actccattca gacatcttta tacttccaaa acccatctta aaaaagcaga
61 atataaaaag tccaaagatg aaaaaggagg aacacctttg aagaaagatt ccaagaaaaa
121 aggaggttca tatgcaacaa atccagaatc caagcaaata gtagaagaga aaactaaaag
181 acaaaatgag gcagataaaa ctcccttaaa atcatcacat gaaaatgaac aatccaagaa
241 gtcaaaatcc agttcagaaa ctaatccaga atcccaaaat tctaagacag tctcaaaaaa
301 ttgttcacaa aaagataaga aagattcaaa gaattccaag aagacaaaca ctgaattcct
361 acatacaaag aacaatccaa agaaagattt gaagaggtca aagactagta atgatcccat
421 atcagagatt tgctcagaaa atagtttaaa tgttgatttc ctcatgttag tgggacagtc
481 tgatgatgaa tccataaatt ttgatgcatg gttaaggaat tactcacaga ataattcaaa
541 gaattattct ttgaagtata caaagtatac aaagaaggac acaaaaaaga atgcaaagaa
601 aagctctgat gctgaatctg aagactcaaa ggatgctaag aaagattcaa agaaagttaa
661 gaaaaatgtc aagaaagatg acaagaaaaa ggatgtaaag aaggacacag agtctactga
721 tgctgaatct ggagactcaa aggatgaaag gaaagataca aagaaggata agaaaaaatt
781 aaagaaagat gacaagaaaa aggacacaaa gaagtaccca gagtctactg atactgaatc
841 aggagatgca aaggatgcaa gaaatgattc aagaaatttg aagaaagctt caaagaatga
901 tgacaagaaa aaggatgcaa agaaaattac attctctact gattctgaat ctgaactgga
961 gtcaaaggag agtcagaaag atgaaaaaaa ggataaaaaa gattcaaaga cagataataa
1021 aaagtctgtc aagaatgatg aagagtctac tgatgctgac tctgaaccga agggagattc
1081 aaaaaagggt aaaaaggatg aaaagaaggg gaagaaagat tcaaagaaag atgacaaaaa
1141 gaaggatgca aagaaaaatg cagaatctac tgaaatggaa tctgatttgg agttaaagaa
1201 ggacaagaaa cactcaaagg aaaagaaagg ttcaaagaaa gatatcaaga aggatgcaag
1261 aaaggacaca gagtctactg atgctgaatt tgatgaatct tccaagacag gctttaaaac
1321 atctacaaaa atcaaaggtt cagatactga atctgaagag tcactatata aacctggggc
1381 taagaagaaa attgatgaat cagatggcac atctgcaaat tcaaagatgg aaggactgga
1441 atcaaagaga ggattcagaa tgtcatccaa aaagactaca ttcaatgaaa aaggggaaaa
1501 agcaagtaca ggtagagttc ctccatcaag agaaaaacca ccactccctg cttgtgagcc
1561 ttctctacca tcaccaaagg tcagacgtct ttgttggtgc aagatgcctc ctccacctcc
1621 aaaaccaaga tatgctcctt tgattcaaag aagacagcgt ttaggagtca gaagatgtca
1681 actacttatg tgatgctagt caagtcatca aaccacttca ggtctcagtt ttctcatctt
1741 acaatgttgt tgggaaggct ccagggcaaa atggatgaga attaaaaagc actctgcaaa
1801 accaaaaaaa aaaaaaaaa
//